a44421a79fb36cc2036fe116b97ea3bc9590cd0c
braney
  Fri Dec 2 09:34:39 2011 -0800
removed rcsid (#295)
diff --git src/hg/lib/lowelabPfamHit.c src/hg/lib/lowelabPfamHit.c
index a30f838..049b14b 100644
--- src/hg/lib/lowelabPfamHit.c
+++ src/hg/lib/lowelabPfamHit.c
@@ -1,188 +1,187 @@
 /* lowelabPfamHit.c was originally generated by the autoSql program, which also 
  * generated lowelabPfamHit.h and lowelabPfamHit.sql.  This module links the database and
  * the RAM representation of objects. */
 
 #include "common.h"
 #include "linefile.h"
 #include "dystring.h"
 #include "jksql.h"
 #include "lowelabPfamHit.h"
 
-static char const rcsid[] = "$Id: lowelabPfamHit.c,v 1.1 2007/06/02 20:50:32 lowe Exp $";
 
 void lowelabPfamHitsStaticLoad(char **row, struct lowelabPfamHits *ret)
 /* Load a row from lowelabPfamHits table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 {
 
 ret->chrom = row[0];
 ret->chromStart = sqlUnsigned(row[1]);
 ret->chromEnd = sqlUnsigned(row[2]);
 ret->name = row[3];
 ret->score = sqlUnsigned(row[4]);
 safecpy(ret->strand, sizeof(ret->strand), row[5]);
 ret->pfamAC = row[6];
 ret->pfamID = row[7];
 ret->swissAC = row[8];
 ret->protCoord = row[9];
 ret->ident = sqlUnsigned(row[10]);
 ret->percLen = sqlUnsigned(row[11]);
 }
 
 struct lowelabPfamHits *lowelabPfamHitsLoad(char **row)
 /* Load a lowelabPfamHits from row fetched with select * from lowelabPfamHits
  * from database.  Dispose of this with lowelabPfamHitsFree(). */
 {
 struct lowelabPfamHits *ret;
 
 AllocVar(ret);
 ret->chrom = cloneString(row[0]);
 ret->chromStart = sqlUnsigned(row[1]);
 ret->chromEnd = sqlUnsigned(row[2]);
 ret->name = cloneString(row[3]);
 ret->score = sqlUnsigned(row[4]);
 safecpy(ret->strand, sizeof(ret->strand), row[5]);
 ret->pfamAC = cloneString(row[6]);
 ret->pfamID = cloneString(row[7]);
 ret->swissAC = cloneString(row[8]);
 ret->protCoord = cloneString(row[9]);
 ret->ident = sqlUnsigned(row[10]);
 ret->percLen = sqlUnsigned(row[11]);
 return ret;
 }
 
 struct lowelabPfamHits *lowelabPfamHitsLoadAll(char *fileName) 
 /* Load all lowelabPfamHits from a whitespace-separated file.
  * Dispose of this with lowelabPfamHitsFreeList(). */
 {
 struct lowelabPfamHits *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[12];
 
 while (lineFileRow(lf, row))
     {
     el = lowelabPfamHitsLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct lowelabPfamHits *lowelabPfamHitsLoadAllByChar(char *fileName, char chopper) 
 /* Load all lowelabPfamHits from a chopper separated file.
  * Dispose of this with lowelabPfamHitsFreeList(). */
 {
 struct lowelabPfamHits *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[12];
 
 while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
     {
     el = lowelabPfamHitsLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct lowelabPfamHits *lowelabPfamHitsCommaIn(char **pS, struct lowelabPfamHits *ret)
 /* Create a lowelabPfamHits out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new lowelabPfamHits */
 {
 char *s = *pS;
 
 if (ret == NULL)
     AllocVar(ret);
 ret->chrom = sqlStringComma(&s);
 ret->chromStart = sqlUnsignedComma(&s);
 ret->chromEnd = sqlUnsignedComma(&s);
 ret->name = sqlStringComma(&s);
 ret->score = sqlUnsignedComma(&s);
 sqlFixedStringComma(&s, ret->strand, sizeof(ret->strand));
 ret->pfamAC = sqlStringComma(&s);
 ret->pfamID = sqlStringComma(&s);
 ret->swissAC = sqlStringComma(&s);
 ret->protCoord = sqlStringComma(&s);
 ret->ident = sqlUnsignedComma(&s);
 ret->percLen = sqlUnsignedComma(&s);
 *pS = s;
 return ret;
 }
 
 void lowelabPfamHitsFree(struct lowelabPfamHits **pEl)
 /* Free a single dynamically allocated lowelabPfamHits such as created
  * with lowelabPfamHitsLoad(). */
 {
 struct lowelabPfamHits *el;
 
 if ((el = *pEl) == NULL) return;
 freeMem(el->chrom);
 freeMem(el->name);
 freeMem(el->pfamAC);
 freeMem(el->pfamID);
 freeMem(el->swissAC);
 freeMem(el->protCoord);
 freez(pEl);
 }
 
 void lowelabPfamHitsFreeList(struct lowelabPfamHits **pList)
 /* Free a list of dynamically allocated lowelabPfamHits's */
 {
 struct lowelabPfamHits *el, *next;
 
 for (el = *pList; el != NULL; el = next)
     {
     next = el->next;
     lowelabPfamHitsFree(&el);
     }
 *pList = NULL;
 }
 
 void lowelabPfamHitsOutput(struct lowelabPfamHits *el, FILE *f, char sep, char lastSep) 
 /* Print out lowelabPfamHits.  Separate fields with sep. Follow last field with lastSep. */
 {
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->chrom);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%u", el->chromStart);
 fputc(sep,f);
 fprintf(f, "%u", el->chromEnd);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->name);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%u", el->score);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->strand);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->pfamAC);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->pfamID);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->swissAC);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->protCoord);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%u", el->ident);
 fputc(sep,f);
 fprintf(f, "%u", el->percLen);
 fputc(lastSep,f);
 }
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */