a44421a79fb36cc2036fe116b97ea3bc9590cd0c
braney
  Fri Dec 2 09:34:39 2011 -0800
removed rcsid (#295)
diff --git src/hg/lib/lsSnpPdb.c src/hg/lib/lsSnpPdb.c
index 21ee921..942088d 100644
--- src/hg/lib/lsSnpPdb.c
+++ src/hg/lib/lsSnpPdb.c
@@ -1,155 +1,154 @@
 /* lsSnpPdb.c was originally generated by the autoSql program, which also 
  * generated lsSnpPdb.h and lsSnpPdb.sql.  This module links the database and
  * the RAM representation of objects. */
 
 #include "common.h"
 #include "linefile.h"
 #include "dystring.h"
 #include "jksql.h"
 #include "lsSnpPdb.h"
 
-static char const rcsid[] = "$Id: lsSnpPdb.c,v 1.1 2008/12/02 01:37:01 markd Exp $";
 
 /* definitions for structType column */
 static char *values_structType[] = {"XRay", "NMR", NULL};
 static struct hash *valhash_structType = NULL;
 
 void lsSnpPdbStaticLoad(char **row, struct lsSnpPdb *ret)
 /* Load a row from lsSnpPdb table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 {
 
 ret->protId = row[0];
 ret->pdbId = row[1];
 ret->structType = sqlEnumParse(row[2], values_structType, &valhash_structType);
 ret->chain = row[3][0];
 ret->snpId = row[4];
 ret->snpPdbLoc = sqlSigned(row[5]);
 }
 
 struct lsSnpPdb *lsSnpPdbLoad(char **row)
 /* Load a lsSnpPdb from row fetched with select * from lsSnpPdb
  * from database.  Dispose of this with lsSnpPdbFree(). */
 {
 struct lsSnpPdb *ret;
 
 AllocVar(ret);
 ret->protId = cloneString(row[0]);
 ret->pdbId = cloneString(row[1]);
 ret->structType = sqlEnumParse(row[2], values_structType, &valhash_structType);
 ret->chain = row[3][0];
 ret->snpId = cloneString(row[4]);
 ret->snpPdbLoc = sqlSigned(row[5]);
 return ret;
 }
 
 struct lsSnpPdb *lsSnpPdbLoadAll(char *fileName) 
 /* Load all lsSnpPdb from a whitespace-separated file.
  * Dispose of this with lsSnpPdbFreeList(). */
 {
 struct lsSnpPdb *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[6];
 
 while (lineFileRow(lf, row))
     {
     el = lsSnpPdbLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct lsSnpPdb *lsSnpPdbLoadAllByChar(char *fileName, char chopper) 
 /* Load all lsSnpPdb from a chopper separated file.
  * Dispose of this with lsSnpPdbFreeList(). */
 {
 struct lsSnpPdb *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[6];
 
 while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
     {
     el = lsSnpPdbLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct lsSnpPdb *lsSnpPdbCommaIn(char **pS, struct lsSnpPdb *ret)
 /* Create a lsSnpPdb out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new lsSnpPdb */
 {
 char *s = *pS;
 
 if (ret == NULL)
     AllocVar(ret);
 ret->protId = sqlStringComma(&s);
 ret->pdbId = sqlStringComma(&s);
 ret->structType = sqlEnumComma(&s, values_structType, &valhash_structType);
 sqlFixedStringComma(&s, &(ret->chain), sizeof(ret->chain));
 ret->snpId = sqlStringComma(&s);
 ret->snpPdbLoc = sqlSignedComma(&s);
 *pS = s;
 return ret;
 }
 
 void lsSnpPdbFree(struct lsSnpPdb **pEl)
 /* Free a single dynamically allocated lsSnpPdb such as created
  * with lsSnpPdbLoad(). */
 {
 struct lsSnpPdb *el;
 
 if ((el = *pEl) == NULL) return;
 freeMem(el->protId);
 freeMem(el->pdbId);
 freeMem(el->snpId);
 freez(pEl);
 }
 
 void lsSnpPdbFreeList(struct lsSnpPdb **pList)
 /* Free a list of dynamically allocated lsSnpPdb's */
 {
 struct lsSnpPdb *el, *next;
 
 for (el = *pList; el != NULL; el = next)
     {
     next = el->next;
     lsSnpPdbFree(&el);
     }
 *pList = NULL;
 }
 
 void lsSnpPdbOutput(struct lsSnpPdb *el, FILE *f, char sep, char lastSep) 
 /* Print out lsSnpPdb.  Separate fields with sep. Follow last field with lastSep. */
 {
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->protId);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->pdbId);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 sqlEnumPrint(f, el->structType, values_structType);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%c", el->chain);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->snpId);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%d", el->snpPdbLoc);
 fputc(lastSep,f);
 }
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */