a44421a79fb36cc2036fe116b97ea3bc9590cd0c braney Fri Dec 2 09:34:39 2011 -0800 removed rcsid (#295) diff --git src/hg/lib/rgdQtl.c src/hg/lib/rgdQtl.c index 3e48117..39d4d7a 100644 --- src/hg/lib/rgdQtl.c +++ src/hg/lib/rgdQtl.c @@ -1,139 +1,138 @@ /* rgdQtl.c was originally generated by the autoSql program, which also * generated rgdQtl.h and rgdQtl.sql. This module links the database and * the RAM representation of objects. */ #include "common.h" #include "linefile.h" #include "dystring.h" #include "jksql.h" #include "rgdQtl.h" -static char const rcsid[] = "$Id: rgdQtl.c,v 1.1 2006/06/01 22:37:50 fanhsu Exp $"; void rgdQtlStaticLoad(char **row, struct rgdQtl *ret) /* Load a row from rgdQtl table into ret. The contents of ret will * be replaced at the next call to this function. */ { ret->bin = sqlSigned(row[0]); ret->chrom = row[1]; ret->chromStart = sqlUnsigned(row[2]); ret->chromEnd = sqlUnsigned(row[3]); ret->name = row[4]; } struct rgdQtl *rgdQtlLoad(char **row) /* Load a rgdQtl from row fetched with select * from rgdQtl * from database. Dispose of this with rgdQtlFree(). */ { struct rgdQtl *ret; AllocVar(ret); ret->bin = sqlSigned(row[0]); ret->chrom = cloneString(row[1]); ret->chromStart = sqlUnsigned(row[2]); ret->chromEnd = sqlUnsigned(row[3]); ret->name = cloneString(row[4]); return ret; } struct rgdQtl *rgdQtlLoadAll(char *fileName) /* Load all rgdQtl from a whitespace-separated file. * Dispose of this with rgdQtlFreeList(). */ { struct rgdQtl *list = NULL, *el; struct lineFile *lf = lineFileOpen(fileName, TRUE); char *row[5]; while (lineFileRow(lf, row)) { el = rgdQtlLoad(row); slAddHead(&list, el); } lineFileClose(&lf); slReverse(&list); return list; } struct rgdQtl *rgdQtlLoadAllByChar(char *fileName, char chopper) /* Load all rgdQtl from a chopper separated file. * Dispose of this with rgdQtlFreeList(). */ { struct rgdQtl *list = NULL, *el; struct lineFile *lf = lineFileOpen(fileName, TRUE); char *row[5]; while (lineFileNextCharRow(lf, chopper, row, ArraySize(row))) { el = rgdQtlLoad(row); slAddHead(&list, el); } lineFileClose(&lf); slReverse(&list); return list; } struct rgdQtl *rgdQtlCommaIn(char **pS, struct rgdQtl *ret) /* Create a rgdQtl out of a comma separated string. * This will fill in ret if non-null, otherwise will * return a new rgdQtl */ { char *s = *pS; if (ret == NULL) AllocVar(ret); ret->bin = sqlSignedComma(&s); ret->chrom = sqlStringComma(&s); ret->chromStart = sqlUnsignedComma(&s); ret->chromEnd = sqlUnsignedComma(&s); ret->name = sqlStringComma(&s); *pS = s; return ret; } void rgdQtlFree(struct rgdQtl **pEl) /* Free a single dynamically allocated rgdQtl such as created * with rgdQtlLoad(). */ { struct rgdQtl *el; if ((el = *pEl) == NULL) return; freeMem(el->chrom); freeMem(el->name); freez(pEl); } void rgdQtlFreeList(struct rgdQtl **pList) /* Free a list of dynamically allocated rgdQtl's */ { struct rgdQtl *el, *next; for (el = *pList; el != NULL; el = next) { next = el->next; rgdQtlFree(&el); } *pList = NULL; } void rgdQtlOutput(struct rgdQtl *el, FILE *f, char sep, char lastSep) /* Print out rgdQtl. Separate fields with sep. Follow last field with lastSep. */ { fprintf(f, "%d", el->bin); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->chrom); if (sep == ',') fputc('"',f); fputc(sep,f); fprintf(f, "%u", el->chromStart); fputc(sep,f); fprintf(f, "%u", el->chromEnd); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->name); if (sep == ',') fputc('"',f); fputc(lastSep,f); } /* -------------------------------- End autoSql Generated Code -------------------------------- */