a44421a79fb36cc2036fe116b97ea3bc9590cd0c
braney
  Fri Dec 2 09:34:39 2011 -0800
removed rcsid (#295)
diff --git src/hg/lib/sangerGeneToWBGeneID.c src/hg/lib/sangerGeneToWBGeneID.c
index d9242e3..c8d1a18 100644
--- src/hg/lib/sangerGeneToWBGeneID.c
+++ src/hg/lib/sangerGeneToWBGeneID.c
@@ -1,184 +1,183 @@
 /* sangerGeneToWBGeneID.c was originally generated by the autoSql program, which also 
  * generated sangerGeneToWBGeneID.h and sangerGeneToWBGeneID.sql.  This module links the database and
  * the RAM representation of objects. */
 
 #include "common.h"
 #include "linefile.h"
 #include "dystring.h"
 #include "jksql.h"
 #include "sangerGeneToWBGeneID.h"
 
-static char const rcsid[] = "$Id: sangerGeneToWBGeneID.c,v 1.1 2007/07/25 18:49:03 hiram Exp $";
 
 void sangerGeneToWBGeneIDStaticLoad(char **row, struct sangerGeneToWBGeneID *ret)
 /* Load a row from sangerGeneToWBGeneID table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 {
 
 ret->sangerGene = row[0];
 ret->WBGeneID = row[1];
 }
 
 struct sangerGeneToWBGeneID *sangerGeneToWBGeneIDLoad(char **row)
 /* Load a sangerGeneToWBGeneID from row fetched with select * from sangerGeneToWBGeneID
  * from database.  Dispose of this with sangerGeneToWBGeneIDFree(). */
 {
 struct sangerGeneToWBGeneID *ret;
 
 AllocVar(ret);
 ret->sangerGene = cloneString(row[0]);
 ret->WBGeneID = cloneString(row[1]);
 return ret;
 }
 
 struct sangerGeneToWBGeneID *sangerGeneToWBGeneIDLoadAll(char *fileName) 
 /* Load all sangerGeneToWBGeneID from a whitespace-separated file.
  * Dispose of this with sangerGeneToWBGeneIDFreeList(). */
 {
 struct sangerGeneToWBGeneID *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[2];
 
 while (lineFileRow(lf, row))
     {
     el = sangerGeneToWBGeneIDLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct sangerGeneToWBGeneID *sangerGeneToWBGeneIDLoadAllByChar(char *fileName, char chopper) 
 /* Load all sangerGeneToWBGeneID from a chopper separated file.
  * Dispose of this with sangerGeneToWBGeneIDFreeList(). */
 {
 struct sangerGeneToWBGeneID *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[2];
 
 while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
     {
     el = sangerGeneToWBGeneIDLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct sangerGeneToWBGeneID *sangerGeneToWBGeneIDLoadByQuery(struct sqlConnection *conn, char *query)
 /* Load all sangerGeneToWBGeneID from table that satisfy the query given.  
  * Where query is of the form 'select * from example where something=something'
  * or 'select example.* from example, anotherTable where example.something = 
  * anotherTable.something'.
  * Dispose of this with sangerGeneToWBGeneIDFreeList(). */
 {
 struct sangerGeneToWBGeneID *list = NULL, *el;
 struct sqlResult *sr;
 char **row;
 
 sr = sqlGetResult(conn, query);
 while ((row = sqlNextRow(sr)) != NULL)
     {
     el = sangerGeneToWBGeneIDLoad(row);
     slAddHead(&list, el);
     }
 slReverse(&list);
 sqlFreeResult(&sr);
 return list;
 }
 
 void sangerGeneToWBGeneIDSaveToDb(struct sqlConnection *conn, struct sangerGeneToWBGeneID *el, char *tableName, int updateSize)
 /* Save sangerGeneToWBGeneID as a row to the table specified by tableName. 
  * As blob fields may be arbitrary size updateSize specifies the approx size
  * of a string that would contain the entire query. Arrays of native types are
  * converted to comma separated strings and loaded as such, User defined types are
  * inserted as NULL. Note that strings must be escaped to allow insertion into the database.
  * For example "autosql's features include" --> "autosql\'s features include" 
  * If worried about this use sangerGeneToWBGeneIDSaveToDbEscaped() */
 {
 struct dyString *update = newDyString(updateSize);
 dyStringPrintf(update, "insert into %s values ( '%s','%s')", 
 	tableName,  el->sangerGene,  el->WBGeneID);
 sqlUpdate(conn, update->string);
 freeDyString(&update);
 }
 
 void sangerGeneToWBGeneIDSaveToDbEscaped(struct sqlConnection *conn, struct sangerGeneToWBGeneID *el, char *tableName, int updateSize)
 /* Save sangerGeneToWBGeneID as a row to the table specified by tableName. 
  * As blob fields may be arbitrary size updateSize specifies the approx size.
  * of a string that would contain the entire query. Automatically 
  * escapes all simple strings (not arrays of string) but may be slower than sangerGeneToWBGeneIDSaveToDb().
  * For example automatically copies and converts: 
  * "autosql's features include" --> "autosql\'s features include" 
  * before inserting into database. */ 
 {
 struct dyString *update = newDyString(updateSize);
 char  *sangerGene, *WBGeneID;
 sangerGene = sqlEscapeString(el->sangerGene);
 WBGeneID = sqlEscapeString(el->WBGeneID);
 
 dyStringPrintf(update, "insert into %s values ( '%s','%s')", 
 	tableName,  sangerGene,  WBGeneID);
 sqlUpdate(conn, update->string);
 freeDyString(&update);
 freez(&sangerGene);
 freez(&WBGeneID);
 }
 
 struct sangerGeneToWBGeneID *sangerGeneToWBGeneIDCommaIn(char **pS, struct sangerGeneToWBGeneID *ret)
 /* Create a sangerGeneToWBGeneID out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new sangerGeneToWBGeneID */
 {
 char *s = *pS;
 
 if (ret == NULL)
     AllocVar(ret);
 ret->sangerGene = sqlStringComma(&s);
 ret->WBGeneID = sqlStringComma(&s);
 *pS = s;
 return ret;
 }
 
 void sangerGeneToWBGeneIDFree(struct sangerGeneToWBGeneID **pEl)
 /* Free a single dynamically allocated sangerGeneToWBGeneID such as created
  * with sangerGeneToWBGeneIDLoad(). */
 {
 struct sangerGeneToWBGeneID *el;
 
 if ((el = *pEl) == NULL) return;
 freeMem(el->sangerGene);
 freeMem(el->WBGeneID);
 freez(pEl);
 }
 
 void sangerGeneToWBGeneIDFreeList(struct sangerGeneToWBGeneID **pList)
 /* Free a list of dynamically allocated sangerGeneToWBGeneID's */
 {
 struct sangerGeneToWBGeneID *el, *next;
 
 for (el = *pList; el != NULL; el = next)
     {
     next = el->next;
     sangerGeneToWBGeneIDFree(&el);
     }
 *pList = NULL;
 }
 
 void sangerGeneToWBGeneIDOutput(struct sangerGeneToWBGeneID *el, FILE *f, char sep, char lastSep) 
 /* Print out sangerGeneToWBGeneID.  Separate fields with sep. Follow last field with lastSep. */
 {
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->sangerGene);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->WBGeneID);
 if (sep == ',') fputc('"',f);
 fputc(lastSep,f);
 }
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */