a44421a79fb36cc2036fe116b97ea3bc9590cd0c
braney
  Fri Dec 2 09:34:39 2011 -0800
removed rcsid (#295)
diff --git src/hg/lib/sargassoSeaXra.c src/hg/lib/sargassoSeaXra.c
index f0a4811..5e5325f 100644
--- src/hg/lib/sargassoSeaXra.c
+++ src/hg/lib/sargassoSeaXra.c
@@ -1,183 +1,182 @@
 /* sargassoSeaXra.c was originally generated by the autoSql program, which also 
  * generated sargassoSeaXra.h and sargassoSeaXra.sql.  This module links the database and
  * the RAM representation of objects. */
 
 #include "common.h"
 #include "linefile.h"
 #include "dystring.h"
 #include "jksql.h"
 #include "sargassoSeaXra.h"
 
-static char const rcsid[] = "$Id: sargassoSeaXra.c,v 1.1 2004/09/29 21:41:18 kschneid Exp $";
 
 void sargassoSeaXraStaticLoad(char **row, struct sargassoSeaXra *ret)
 /* Load a row from sargassoSeaXra table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 {
 
 ret->qName = row[0];
 strcpy(ret->code, row[1]);
 ret->evalue = row[2];
 ret->GI = sqlUnsigned(row[3]);
 ret->PI = atof(row[4]);
 ret->length = sqlUnsigned(row[5]);
 ret->gap = sqlUnsigned(row[6]);
 ret->score = sqlUnsigned(row[7]);
 ret->queryseqstart = sqlUnsigned(row[8]);
 ret->queryseqend = sqlUnsigned(row[9]);
 strcpy(ret->species, row[10]);
 ret->thisseqstart = sqlUnsigned(row[11]);
 ret->thisseqend = sqlUnsigned(row[12]);
 }
 
 struct sargassoSeaXra *sargassoSeaXraLoad(char **row)
 /* Load a sargassoSeaXra from row fetched with select * from sargassoSeaXra
  * from database.  Dispose of this with sargassoSeaXraFree(). */
 {
 struct sargassoSeaXra *ret;
 
 AllocVar(ret);
 ret->qName = cloneString(row[0]);
 strcpy(ret->code, row[1]);
 ret->evalue = cloneString(row[2]);
 ret->GI = sqlUnsigned(row[3]);
 ret->PI = atof(row[4]);
 ret->length = sqlUnsigned(row[5]);
 ret->gap = sqlUnsigned(row[6]);
 ret->score = sqlUnsigned(row[7]);
 ret->queryseqstart = sqlUnsigned(row[8]);
 ret->queryseqend = sqlUnsigned(row[9]);
 strcpy(ret->species, row[10]);
 ret->thisseqstart = sqlUnsigned(row[11]);
 ret->thisseqend = sqlUnsigned(row[12]);
 return ret;
 }
 
 struct sargassoSeaXra *sargassoSeaXraLoadAll(char *fileName) 
 /* Load all sargassoSeaXra from a whitespace-separated file.
  * Dispose of this with sargassoSeaXraFreeList(). */
 {
 struct sargassoSeaXra *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[13];
 
 while (lineFileRow(lf, row))
     {
     el = sargassoSeaXraLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct sargassoSeaXra *sargassoSeaXraLoadAllByChar(char *fileName, char chopper) 
 /* Load all sargassoSeaXra from a chopper separated file.
  * Dispose of this with sargassoSeaXraFreeList(). */
 {
 struct sargassoSeaXra *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[13];
 
 while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
     {
     el = sargassoSeaXraLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct sargassoSeaXra *sargassoSeaXraCommaIn(char **pS, struct sargassoSeaXra *ret)
 /* Create a sargassoSeaXra out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new sargassoSeaXra */
 {
 char *s = *pS;
 
 if (ret == NULL)
     AllocVar(ret);
 ret->qName = sqlStringComma(&s);
 sqlFixedStringComma(&s, ret->code, sizeof(ret->code));
 ret->evalue = sqlStringComma(&s);
 ret->GI = sqlUnsignedComma(&s);
 ret->PI = sqlFloatComma(&s);
 ret->length = sqlUnsignedComma(&s);
 ret->gap = sqlUnsignedComma(&s);
 ret->score = sqlUnsignedComma(&s);
 ret->queryseqstart = sqlUnsignedComma(&s);
 ret->queryseqend = sqlUnsignedComma(&s);
 sqlFixedStringComma(&s, ret->species, sizeof(ret->species));
 ret->thisseqstart = sqlUnsignedComma(&s);
 ret->thisseqend = sqlUnsignedComma(&s);
 *pS = s;
 return ret;
 }
 
 void sargassoSeaXraFree(struct sargassoSeaXra **pEl)
 /* Free a single dynamically allocated sargassoSeaXra such as created
  * with sargassoSeaXraLoad(). */
 {
 struct sargassoSeaXra *el;
 
 if ((el = *pEl) == NULL) return;
 freeMem(el->qName);
 freeMem(el->evalue);
 freez(pEl);
 }
 
 void sargassoSeaXraFreeList(struct sargassoSeaXra **pList)
 /* Free a list of dynamically allocated sargassoSeaXra's */
 {
 struct sargassoSeaXra *el, *next;
 
 for (el = *pList; el != NULL; el = next)
     {
     next = el->next;
     sargassoSeaXraFree(&el);
     }
 *pList = NULL;
 }
 
 void sargassoSeaXraOutput(struct sargassoSeaXra *el, FILE *f, char sep, char lastSep) 
 /* Print out sargassoSeaXra.  Separate fields with sep. Follow last field with lastSep. */
 {
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->qName);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->code);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->evalue);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%u", el->GI);
 fputc(sep,f);
 fprintf(f, "%g", el->PI);
 fputc(sep,f);
 fprintf(f, "%u", el->length);
 fputc(sep,f);
 fprintf(f, "%u", el->gap);
 fputc(sep,f);
 fprintf(f, "%u", el->score);
 fputc(sep,f);
 fprintf(f, "%u", el->queryseqstart);
 fputc(sep,f);
 fprintf(f, "%u", el->queryseqend);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->species);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%u", el->thisseqstart);
 fputc(sep,f);
 fprintf(f, "%u", el->thisseqend);
 fputc(lastSep,f);
 }
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */