a44421a79fb36cc2036fe116b97ea3bc9590cd0c braney Fri Dec 2 09:34:39 2011 -0800 removed rcsid (#295) diff --git src/hg/lib/stsMapMouseNew.c src/hg/lib/stsMapMouseNew.c index 025ec7f..0857b2a 100644 --- src/hg/lib/stsMapMouseNew.c +++ src/hg/lib/stsMapMouseNew.c @@ -1,204 +1,203 @@ /* stsMapMouseNew.c was originally generated by the autoSql program, which also * generated stsMapMouseNew.h and stsMapMouseNew.sql. This module links the database and * the RAM representation of objects. */ #include "common.h" #include "linefile.h" #include "dystring.h" #include "jksql.h" #include "stsMapMouseNew.h" -static char const rcsid[] = "$Id: stsMapMouseNew.c,v 1.4 2005/04/13 06:25:57 markd Exp $"; void stsMapMouseNewStaticLoad(char **row, struct stsMapMouseNew *ret) /* Load a row from stsMapMouseNew table into ret. The contents of ret will * be replaced at the next call to this function. */ { ret->chrom = row[0]; ret->chromStart = sqlSigned(row[1]); ret->chromEnd = sqlUnsigned(row[2]); ret->name = row[3]; ret->score = sqlUnsigned(row[4]); ret->identNo = sqlUnsigned(row[5]); ret->ctgAcc = row[6]; ret->otherAcc = row[7]; ret->rhChrom = row[8]; ret->rhPos = atof(row[9]); ret->rhLod = atof(row[10]); ret->wigChr = row[11]; ret->wigPos = atof(row[12]); ret->mgiChrom = row[13]; ret->mgiPos = atof(row[14]); } struct stsMapMouseNew *stsMapMouseNewLoad(char **row) /* Load a stsMapMouseNew from row fetched with select * from stsMapMouseNew * from database. Dispose of this with stsMapMouseNewFree(). */ { struct stsMapMouseNew *ret; AllocVar(ret); ret->chrom = cloneString(row[0]); ret->chromStart = sqlSigned(row[1]); ret->chromEnd = sqlUnsigned(row[2]); ret->name = cloneString(row[3]); ret->score = sqlUnsigned(row[4]); ret->identNo = sqlUnsigned(row[5]); ret->ctgAcc = cloneString(row[6]); ret->otherAcc = cloneString(row[7]); ret->rhChrom = cloneString(row[8]); ret->rhPos = atof(row[9]); ret->rhLod = atof(row[10]); ret->wigChr = cloneString(row[11]); ret->wigPos = atof(row[12]); ret->mgiChrom = cloneString(row[13]); ret->mgiPos = atof(row[14]); return ret; } struct stsMapMouseNew *stsMapMouseNewLoadAll(char *fileName) /* Load all stsMapMouseNew from a whitespace-separated file. * Dispose of this with stsMapMouseNewFreeList(). */ { struct stsMapMouseNew *list = NULL, *el; struct lineFile *lf = lineFileOpen(fileName, TRUE); char *row[15]; while (lineFileRow(lf, row)) { el = stsMapMouseNewLoad(row); slAddHead(&list, el); } lineFileClose(&lf); slReverse(&list); return list; } struct stsMapMouseNew *stsMapMouseNewLoadAllByChar(char *fileName, char chopper) /* Load all stsMapMouseNew from a chopper separated file. * Dispose of this with stsMapMouseNewFreeList(). */ { struct stsMapMouseNew *list = NULL, *el; struct lineFile *lf = lineFileOpen(fileName, TRUE); char *row[15]; while (lineFileNextCharRow(lf, chopper, row, ArraySize(row))) { el = stsMapMouseNewLoad(row); slAddHead(&list, el); } lineFileClose(&lf); slReverse(&list); return list; } struct stsMapMouseNew *stsMapMouseNewCommaIn(char **pS, struct stsMapMouseNew *ret) /* Create a stsMapMouseNew out of a comma separated string. * This will fill in ret if non-null, otherwise will * return a new stsMapMouseNew */ { char *s = *pS; if (ret == NULL) AllocVar(ret); ret->chrom = sqlStringComma(&s); ret->chromStart = sqlSignedComma(&s); ret->chromEnd = sqlUnsignedComma(&s); ret->name = sqlStringComma(&s); ret->score = sqlUnsignedComma(&s); ret->identNo = sqlUnsignedComma(&s); ret->ctgAcc = sqlStringComma(&s); ret->otherAcc = sqlStringComma(&s); ret->rhChrom = sqlStringComma(&s); ret->rhPos = sqlFloatComma(&s); ret->rhLod = sqlFloatComma(&s); ret->wigChr = sqlStringComma(&s); ret->wigPos = sqlFloatComma(&s); ret->mgiChrom = sqlStringComma(&s); ret->mgiPos = sqlFloatComma(&s); *pS = s; return ret; } void stsMapMouseNewFree(struct stsMapMouseNew **pEl) /* Free a single dynamically allocated stsMapMouseNew such as created * with stsMapMouseNewLoad(). */ { struct stsMapMouseNew *el; if ((el = *pEl) == NULL) return; freeMem(el->chrom); freeMem(el->name); freeMem(el->ctgAcc); freeMem(el->otherAcc); freeMem(el->rhChrom); freeMem(el->wigChr); freeMem(el->mgiChrom); freez(pEl); } void stsMapMouseNewFreeList(struct stsMapMouseNew **pList) /* Free a list of dynamically allocated stsMapMouseNew's */ { struct stsMapMouseNew *el, *next; for (el = *pList; el != NULL; el = next) { next = el->next; stsMapMouseNewFree(&el); } *pList = NULL; } void stsMapMouseNewOutput(struct stsMapMouseNew *el, FILE *f, char sep, char lastSep) /* Print out stsMapMouseNew. Separate fields with sep. Follow last field with lastSep. */ { if (sep == ',') fputc('"',f); fprintf(f, "%s", el->chrom); if (sep == ',') fputc('"',f); fputc(sep,f); fprintf(f, "%d", el->chromStart); fputc(sep,f); fprintf(f, "%u", el->chromEnd); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->name); if (sep == ',') fputc('"',f); fputc(sep,f); fprintf(f, "%u", el->score); fputc(sep,f); fprintf(f, "%u", el->identNo); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->ctgAcc); if (sep == ',') fputc('"',f); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->otherAcc); if (sep == ',') fputc('"',f); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->rhChrom); if (sep == ',') fputc('"',f); fputc(sep,f); fprintf(f, "%f", el->rhPos); fputc(sep,f); fprintf(f, "%f", el->rhLod); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->wigChr); if (sep == ',') fputc('"',f); fputc(sep,f); fprintf(f, "%f", el->wigPos); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->mgiChrom); if (sep == ',') fputc('"',f); fputc(sep,f); fprintf(f, "%f", el->mgiPos); fputc(lastSep,f); } /* -------------------------------- End autoSql Generated Code -------------------------------- */