a44421a79fb36cc2036fe116b97ea3bc9590cd0c
braney
  Fri Dec 2 09:34:39 2011 -0800
removed rcsid (#295)
diff --git src/hg/lib/tigrOperon.c src/hg/lib/tigrOperon.c
index 1de6241..2b09948 100644
--- src/hg/lib/tigrOperon.c
+++ src/hg/lib/tigrOperon.c
@@ -1,152 +1,151 @@
 /* tigrOperon.c was originally generated by the autoSql program, which also 
  * generated tigrOperon.h and tigrOperon.sql.  This module links the database and
  * the RAM representation of objects. */
 
 #include "common.h"
 #include "linefile.h"
 #include "dystring.h"
 #include "jksql.h"
 #include "tigrOperon.h"
 
-static char const rcsid[] = "$Id: tigrOperon.c,v 1.1 2004/08/25 12:05:00 aamp Exp $";
 
 struct tigrOperon *tigrOperonLoad(char **row)
 /* Load a tigrOperon from row fetched with select * from tigrOperon
  * from database.  Dispose of this with tigrOperonFree(). */
 {
 struct tigrOperon *ret;
 
 AllocVar(ret);
 ret->size = sqlUnsigned(row[1]);
 ret->name = cloneString(row[0]);
 {
 int sizeOne;
 sqlStringDynamicArray(row[2], &ret->genes, &sizeOne);
 assert(sizeOne == ret->size);
 }
 ret->info = cloneString(row[3]);
 return ret;
 }
 
 struct tigrOperon *tigrOperonLoadAll(char *fileName) 
 /* Load all tigrOperon from a whitespace-separated file.
  * Dispose of this with tigrOperonFreeList(). */
 {
 struct tigrOperon *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[4];
 
 while (lineFileRow(lf, row))
     {
     el = tigrOperonLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct tigrOperon *tigrOperonLoadAllByChar(char *fileName, char chopper) 
 /* Load all tigrOperon from a chopper separated file.
  * Dispose of this with tigrOperonFreeList(). */
 {
 struct tigrOperon *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[4];
 
 while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
     {
     el = tigrOperonLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct tigrOperon *tigrOperonCommaIn(char **pS, struct tigrOperon *ret)
 /* Create a tigrOperon out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new tigrOperon */
 {
 char *s = *pS;
 
 if (ret == NULL)
     AllocVar(ret);
 ret->name = sqlStringComma(&s);
 ret->size = sqlUnsignedComma(&s);
 {
 int i;
 s = sqlEatChar(s, '{');
 AllocArray(ret->genes, ret->size);
 for (i=0; i<ret->size; ++i)
     {
     ret->genes[i] = sqlStringComma(&s);
     }
 s = sqlEatChar(s, '}');
 s = sqlEatChar(s, ',');
 }
 ret->info = sqlStringComma(&s);
 *pS = s;
 return ret;
 }
 
 void tigrOperonFree(struct tigrOperon **pEl)
 /* Free a single dynamically allocated tigrOperon such as created
  * with tigrOperonLoad(). */
 {
 struct tigrOperon *el;
 
 if ((el = *pEl) == NULL) return;
 freeMem(el->name);
 /* All strings in genes are allocated at once, so only need to free first. */
 if (el->genes != NULL)
     freeMem(el->genes[0]);
 freeMem(el->genes);
 freeMem(el->info);
 freez(pEl);
 }
 
 void tigrOperonFreeList(struct tigrOperon **pList)
 /* Free a list of dynamically allocated tigrOperon's */
 {
 struct tigrOperon *el, *next;
 
 for (el = *pList; el != NULL; el = next)
     {
     next = el->next;
     tigrOperonFree(&el);
     }
 *pList = NULL;
 }
 
 void tigrOperonOutput(struct tigrOperon *el, FILE *f, char sep, char lastSep) 
 /* Print out tigrOperon.  Separate fields with sep. Follow last field with lastSep. */
 {
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->name);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%u", el->size);
 fputc(sep,f);
 {
 int i;
 if (sep == ',') fputc('{',f);
 for (i=0; i<el->size; ++i)
     {
     if (sep == ',') fputc('"',f);
     fprintf(f, "%s", el->genes[i]);
     if (sep == ',') fputc('"',f);
     fputc(',', f);
     }
 if (sep == ',') fputc('}',f);
 }
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->info);
 if (sep == ',') fputc('"',f);
 fputc(lastSep,f);
 }
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */