a44421a79fb36cc2036fe116b97ea3bc9590cd0c braney Fri Dec 2 09:34:39 2011 -0800 removed rcsid (#295) diff --git src/hg/lib/txRnaAccs.c src/hg/lib/txRnaAccs.c index 6489019..94e3e29 100644 --- src/hg/lib/txRnaAccs.c +++ src/hg/lib/txRnaAccs.c @@ -1,152 +1,151 @@ /* txRnaAccs.c was originally generated by the autoSql program, which also * generated txRnaAccs.h and txRnaAccs.sql. This module links the database and * the RAM representation of objects. */ #include "common.h" #include "linefile.h" #include "dystring.h" #include "jksql.h" #include "txRnaAccs.h" -static char const rcsid[] = "$Id: txRnaAccs.c,v 1.1 2007/03/02 09:36:06 kent Exp $"; struct txRnaAccs *txRnaAccsLoad(char **row) /* Load a txRnaAccs from row fetched with select * from txRnaAccs * from database. Dispose of this with txRnaAccsFree(). */ { struct txRnaAccs *ret; AllocVar(ret); ret->accCount = sqlSigned(row[2]); ret->name = cloneString(row[0]); ret->primary = cloneString(row[1]); { int sizeOne; sqlStringDynamicArray(row[3], &ret->accs, &sizeOne); assert(sizeOne == ret->accCount); } return ret; } struct txRnaAccs *txRnaAccsLoadAll(char *fileName) /* Load all txRnaAccs from a whitespace-separated file. * Dispose of this with txRnaAccsFreeList(). */ { struct txRnaAccs *list = NULL, *el; struct lineFile *lf = lineFileOpen(fileName, TRUE); char *row[4]; while (lineFileRow(lf, row)) { el = txRnaAccsLoad(row); slAddHead(&list, el); } lineFileClose(&lf); slReverse(&list); return list; } struct txRnaAccs *txRnaAccsLoadAllByChar(char *fileName, char chopper) /* Load all txRnaAccs from a chopper separated file. * Dispose of this with txRnaAccsFreeList(). */ { struct txRnaAccs *list = NULL, *el; struct lineFile *lf = lineFileOpen(fileName, TRUE); char *row[4]; while (lineFileNextCharRow(lf, chopper, row, ArraySize(row))) { el = txRnaAccsLoad(row); slAddHead(&list, el); } lineFileClose(&lf); slReverse(&list); return list; } struct txRnaAccs *txRnaAccsCommaIn(char **pS, struct txRnaAccs *ret) /* Create a txRnaAccs out of a comma separated string. * This will fill in ret if non-null, otherwise will * return a new txRnaAccs */ { char *s = *pS; if (ret == NULL) AllocVar(ret); ret->name = sqlStringComma(&s); ret->primary = sqlStringComma(&s); ret->accCount = sqlSignedComma(&s); { int i; s = sqlEatChar(s, '{'); AllocArray(ret->accs, ret->accCount); for (i=0; i<ret->accCount; ++i) { ret->accs[i] = sqlStringComma(&s); } s = sqlEatChar(s, '}'); s = sqlEatChar(s, ','); } *pS = s; return ret; } void txRnaAccsFree(struct txRnaAccs **pEl) /* Free a single dynamically allocated txRnaAccs such as created * with txRnaAccsLoad(). */ { struct txRnaAccs *el; if ((el = *pEl) == NULL) return; freeMem(el->name); freeMem(el->primary); /* All strings in accs are allocated at once, so only need to free first. */ if (el->accs != NULL) freeMem(el->accs[0]); freeMem(el->accs); freez(pEl); } void txRnaAccsFreeList(struct txRnaAccs **pList) /* Free a list of dynamically allocated txRnaAccs's */ { struct txRnaAccs *el, *next; for (el = *pList; el != NULL; el = next) { next = el->next; txRnaAccsFree(&el); } *pList = NULL; } void txRnaAccsOutput(struct txRnaAccs *el, FILE *f, char sep, char lastSep) /* Print out txRnaAccs. Separate fields with sep. Follow last field with lastSep. */ { if (sep == ',') fputc('"',f); fprintf(f, "%s", el->name); if (sep == ',') fputc('"',f); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->primary); if (sep == ',') fputc('"',f); fputc(sep,f); fprintf(f, "%d", el->accCount); fputc(sep,f); { int i; if (sep == ',') fputc('{',f); for (i=0; i<el->accCount; ++i) { if (sep == ',') fputc('"',f); fprintf(f, "%s", el->accs[i]); if (sep == ',') fputc('"',f); fputc(',', f); } if (sep == ',') fputc('}',f); } fputc(lastSep,f); } /* -------------------------------- End autoSql Generated Code -------------------------------- */