a44421a79fb36cc2036fe116b97ea3bc9590cd0c braney Fri Dec 2 09:34:39 2011 -0800 removed rcsid (#295) diff --git src/hg/lib/wabAli.c src/hg/lib/wabAli.c index 664ad1a..d85177c 100644 --- src/hg/lib/wabAli.c +++ src/hg/lib/wabAli.c @@ -1,145 +1,144 @@ /* wabAli.c was originally generated by the autoSql program, which also * generated wabAli.h and wabAli.sql. This module links the database and the RAM * representation of objects. */ #include "common.h" #include "jksql.h" #include "wabAli.h" -static char const rcsid[] = "$Id: wabAli.c,v 1.4 2005/04/13 06:25:58 markd Exp $"; void wabAliStaticLoad(char **row, struct wabAli *ret) /* Load a row from wabAli table into ret. The contents of ret will * be replaced at the next call to this function. */ { ret->query = row[0]; ret->qStart = sqlUnsigned(row[1]); ret->qEnd = sqlUnsigned(row[2]); strcpy(ret->strand, row[3]); ret->chrom = row[4]; ret->chromStart = sqlUnsigned(row[5]); ret->chromEnd = sqlUnsigned(row[6]); ret->milliScore = sqlUnsigned(row[7]); ret->symCount = sqlUnsigned(row[8]); ret->qSym = row[9]; ret->tSym = row[10]; ret->hSym = row[11]; } struct wabAli *wabAliLoad(char **row) /* Load a wabAli from row fetched with select * from wabAli * from database. Dispose of this with wabAliFree(). */ { struct wabAli *ret; AllocVar(ret); ret->query = cloneString(row[0]); ret->qStart = sqlUnsigned(row[1]); ret->qEnd = sqlUnsigned(row[2]); strcpy(ret->strand, row[3]); ret->chrom = cloneString(row[4]); ret->chromStart = sqlUnsigned(row[5]); ret->chromEnd = sqlUnsigned(row[6]); ret->milliScore = sqlUnsigned(row[7]); ret->symCount = sqlUnsigned(row[8]); ret->qSym = cloneStringZ(row[9], ret->symCount); ret->tSym = cloneStringZ(row[10], ret->symCount); ret->hSym = cloneStringZ(row[11], ret->symCount); return ret; } struct wabAli *wabAliCommaIn(char **pS, struct wabAli *ret) /* Create a wabAli out of a comma separated string. * This will fill in ret if non-null, otherwise will * return a new wabAli */ { char *s = *pS; if (ret == NULL) AllocVar(ret); ret->query = sqlStringComma(&s); ret->qStart = sqlUnsignedComma(&s); ret->qEnd = sqlUnsignedComma(&s); sqlFixedStringComma(&s, ret->strand, sizeof(ret->strand)); ret->chrom = sqlStringComma(&s); ret->chromStart = sqlUnsignedComma(&s); ret->chromEnd = sqlUnsignedComma(&s); ret->milliScore = sqlUnsignedComma(&s); ret->symCount = sqlUnsignedComma(&s); ret->qSym = sqlStringComma(&s); ret->tSym = sqlStringComma(&s); ret->hSym = sqlStringComma(&s); *pS = s; return ret; } void wabAliFree(struct wabAli **pEl) /* Free a single dynamically allocated wabAli such as created * with wabAliLoad(). */ { struct wabAli *el; if ((el = *pEl) == NULL) return; freeMem(el->query); freeMem(el->chrom); freeMem(el->qSym); freeMem(el->tSym); freeMem(el->hSym); freez(pEl); } void wabAliFreeList(struct wabAli **pList) /* Free a list of dynamically allocated wabAli's */ { struct wabAli *el, *next; for (el = *pList; el != NULL; el = next) { next = el->next; wabAliFree(&el); } *pList = NULL; } void wabAliOutput(struct wabAli *el, FILE *f, char sep, char lastSep) /* Print out wabAli. Separate fields with sep. Follow last field with lastSep. */ { if (sep == ',') fputc('"',f); fprintf(f, "%s", el->query); if (sep == ',') fputc('"',f); fputc(sep,f); fprintf(f, "%u", el->qStart); fputc(sep,f); fprintf(f, "%u", el->qEnd); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->strand); if (sep == ',') fputc('"',f); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->chrom); if (sep == ',') fputc('"',f); fputc(sep,f); fprintf(f, "%u", el->chromStart); fputc(sep,f); fprintf(f, "%u", el->chromEnd); fputc(sep,f); fprintf(f, "%u", el->milliScore); fputc(sep,f); fprintf(f, "%u", el->symCount); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->qSym); if (sep == ',') fputc('"',f); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->tSym); if (sep == ',') fputc('"',f); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->hSym); if (sep == ',') fputc('"',f); fputc(lastSep,f); }