cb72f93299e06e1f3061575037ae21a58f8cd892
donnak
  Wed Nov 23 01:49:44 2011 -0800
Made a few more edits to cow announcement, fixed a few format glitches and typos, including some noted by Steve.
diff --git src/hg/htdocs/indexNews.html src/hg/htdocs/indexNews.html
index 4610bef..7139746 100644
--- src/hg/htdocs/indexNews.html
+++ src/hg/htdocs/indexNews.html
@@ -32,42 +32,43 @@
 		    In response to the many requests from the bovine research
 		    community, we now offer the University of Maryland (UMD)
 		    <em>Bos taurus</em> assembly in the Genome Browser, in 
 		    addition to the assemblies produced by the Baylor College 
 		    of Medicine Human Genome Sequencing Center. The UMD v3.1 
 		    assembly (Nov. 2009, UCSC bosTau6) was produced by the 
 		    <A HREF="http://www.cbcb.umd.edu/" TARGET=_blank>UMD Center 
 		    for Bioinformatics and Computational 
 		    Biology</A> (CBCB) in College Park, MD. </P>
 		    <P>
 		    The UMD 3.1 assembly is based on reads downloaded from 
 		    the NCBI Trace Archive, most of which were sequenced by
 		    the Baylor College of Medicine. UMD reports that they were
 		    able to apply several assembly improvement techniques
 		    to produce an assembly that is substantially more accurate 
-		    and complete than alternative versions, as evaluated using
-		    independent metrics. Based on UMD statistics, this 
-		    assembly provides more genome coverage, closes 
-		    thousands of gaps, corrects many erroneous inversions, 
-		    deletions, and translocations, and fixes thousands of 
-		    single-nucleotide errors. For more information, see 
-		    Zimina AV <em>et al</em>, 
+		    and complete than previous alternative versions, as 
+		    evaluated using independent metrics. Based on UMD 
+		    statistics, this assembly provides more genome coverage, 
+		    closes thousands of gaps, corrects many erroneous 
+		    inversions, deletions, and translocations, and fixes 
+		    thousands of single-nucleotide errors. For more information,
+		    see Zimin AV <em>et al</em>, 
 		    <A HREF="http://genomebiology.com/2009/10/4/R42"
 		    TARGET=_blank>A whole-genome assembly of the domestic
-		    cow, Bos taurus</A>, <em>Genome Biol.</em>2009;10(4) and 
+		    cow, <em>Bos taurus</em></A>, <em>Genome Biol.</em> 2009;10(4) and 
 		    the UMD CBCB 
-		    <A HREF="http://www.cbcb.umd.edu/research/bos_taurus_assembly.shtml">Bos taurus assembly</A> web page.</P>
+		    <A HREF="http://www.cbcb.umd.edu/research/bos_taurus_assembly.shtml"
+		    TARGET=_blank><em>Bos taurus</em> assembly</A> web page.</P>
 		    <P>
 		    Downloads of the UMD bovine data and annotations may be 
 		    obtained from the UCSC Genome Browser 
 		    <A HREF="ftp://hgdownload.cse.ucsc.edu/goldenPath/bosTau6/">FTP server</A> 
 		    or <A HREF="http://hgdownload.cse.ucsc.edu/downloads.html#cow">Downloads</A> page.
 		    </P>
 		    <P>
               	    We'd like to thank the UMD CBCB for providing this genome 
 		    assembly. The UMD Cow Genome Browser and annotation tracks 
 		    were produced by Hiram Clawson, Chin Li, Brooke Rhead, Greg 
 		    Roe, Steve Heitner, and Donna Karolchik.  See the 
 		    <A HREF="goldenPath/credits.html#cow_credits">Credits</A> 
 		    page for a detailed list of the organizations and 
 		    individuals who contributed to this release.  </P>
 		    <P>