16425d1c9b3f0ea91aef3114f60acb8443e1194b
hiram
  Thu Nov 10 09:55:33 2011 -0800
adding ensembl gene table definitions and fixing the score column of genePredExt
diff --git src/hg/lib/genePredExt.as src/hg/lib/genePredExt.as
index 43d5515..c9e7976 100644
--- src/hg/lib/genePredExt.as
+++ src/hg/lib/genePredExt.as
@@ -1,20 +1,20 @@
 table genePredExt
 "A gene prediction with some additional info."
     (
     string name;	"Name of gene (usually transcript_id from GTF)"
     string chrom;	"Reference sequence chromosome or scaffold"
     char[1] strand;     "+ or - for strand"
     uint txStart;	"Transcription start position"
     uint txEnd;         "Transcription end position"
     uint cdsStart;	"Coding region start"
     uint cdsEnd;        "Coding region end"
     uint exonCount;     "Number of exons"
     uint[exonCount] exonStarts; "Exon start positions"
     uint[exonCount] exonEnds;   "Exon end positions"
-    uint id;            "Unique identifier"
+    uint score;         "score"
     string name2;       "Alternate name (e.g. gene_id from GTF)"
     string cdsStartStat; "enum('none','unk','incmpl','cmpl')"
     string cdsEndStat;   "enum('none','unk','incmpl','cmpl')"
     int[exonCount] exonFrames; "Exon frame {0,1,2}, or -1 if no frame for exon"
     )