060ada2535fca719656219c1214a3e1c16490693
tdreszer
  Wed Nov 9 16:06:41 2011 -0800
Moved as code in hgTables down to lib and access it from hgc and hgTrackUi.  This is to remove 'extraFields' support as per Jim's request in redmine 5883 and 5582
diff --git src/hg/hgTables/asObj.c src/hg/hgTables/asObj.c
deleted file mode 100644
index 3acffb3..0000000
--- src/hg/hgTables/asObj.c
+++ /dev/null
@@ -1,111 +0,0 @@
-/* asObj - get and use parsed autoSQL objects describing table. */
-
-#include "common.h"
-#include "linefile.h"
-#include "jksql.h"
-#include "asParse.h"
-#include "errCatch.h"
-#include "hgTables.h"
-
-static char const rcsid[] = "$Id: asObj.c,v 1.4 2009/05/20 20:59:55 mikep Exp $";
-
-static struct asObject *asForTableOrDie(struct sqlConnection *conn, char *table)
-/* Get autoSQL description if any associated with table.   Abort if
- * there's a problem*/
-{
-struct asObject *asObj = NULL;
-if (isBigBed(database, table, curTrack, ctLookupName))
-    asObj = bigBedAsForTable(table, conn);
-else if (isBamTable(table))
-    asObj = bamAsObj();
-else if (isVcfTable(table))
-    asObj = vcfAsObj();
-else
-    {
-    if (sqlTableExists(conn, "tableDescriptions"))
-	{
-	char query[256];
-	char *asText = NULL;
-
-	/* Try split table first. */
-	safef(query, sizeof(query), 
-	    "select autoSqlDef from tableDescriptions where tableName='chrN_%s'",
-	    table);
-	asText = sqlQuickString(conn, query);
-
-	/* If no result try unsplit table. */
-	if (asText == NULL)
-	    {
-	    safef(query, sizeof(query), 
-		"select autoSqlDef from tableDescriptions where tableName='%s'",
-		table);
-	    asText = sqlQuickString(conn, query);
-	    }
-	if (asText != NULL && asText[0] != 0)
-	    {
-	    asObj = asParseText(asText);
-	    }
-	freez(&asText);
-	}
-    }
-return asObj;
-}
-
-struct asObject *asForTable(struct sqlConnection *conn, char *table)
-/* Get autoSQL description if any associated with table. */
-/* Wrap some error catching around asForTable. */
-{
-struct errCatch *errCatch = errCatchNew();
-struct asObject *asObj = NULL;
-if (errCatchStart(errCatch))
-    {
-    asObj = asForTableOrDie(conn, table);
-    }
-errCatchEnd(errCatch);
-errCatchFree(&errCatch);
-return asObj;
-}
-
-struct asColumn *asColumnFind(struct asObject *asObj, char *name)
-/* Return named column. */
-{
-struct asColumn *asCol = NULL;
-if (asObj!= NULL)
-    {
-    for (asCol = asObj->columnList; asCol != NULL; asCol = asCol->next)
-        if (sameString(asCol->name, name))
-	     break;
-    }
-return asCol;
-}
-
-struct slName *asColNames(struct asObject *as)
-/* Get list of column names. */
-{
-struct slName *list = NULL, *el;
-struct asColumn *col;
-for (col = as->columnList; col != NULL; col = col->next)
-    {
-    el = slNameNew(col->name);
-    slAddHead(&list, el);
-    }
-slReverse(&list);
-return list;
-}
-
-struct sqlFieldType *sqlFieldTypesFromAs(struct asObject *as)
-/* Convert asObject to list of sqlFieldTypes */
-{
-struct sqlFieldType *ft, *list = NULL;
-struct asColumn *col;
-for (col = as->columnList; col != NULL; col = col->next)
-    {
-    struct dyString *type = asColumnToSqlType(col);
-    ft = sqlFieldTypeNew(col->name, type->string);
-    slAddHead(&list, ft);
-    dyStringFree(&type);
-    }
-slReverse(&list);
-return list;
-}
-