6e23c5700ff2d2d1ade34de13cddfd3c2bf8ec3a
wong
  Mon Nov 14 17:00:42 2011 -0800
reworked the makefiles to allow for a split pipeline
diff --git src/hg/encode/makefile src/hg/encode/makefile
index 48de843..079bac5 100644
--- src/hg/encode/makefile
+++ src/hg/encode/makefile
@@ -1,49 +1,51 @@
 # Build all programs in encode directory
 
 # List of directories to build
 
 DIRS = \
 	hgEncodeDataVersions \
 	mkEncodeFrameset \
 	hgEncodeVocab \
 	validateFiles \
     encodeMkChangeNotes \
     paraMd5sum \
 	encodeStatus
 
 # broken
 	#ldGencodeIntron \
 	#regionAgp \
 
 # List of pipeline dirs
 PIPELINE_DIRS = \
         encodeLoad \
-        encodeValidate
+        encodeValidate \
+	../utils/automation
 
 USE_DIRS = $(DIRS)
 
 all:
+	@${MAKE} development
 	@for D in $(USE_DIRS) x; do \
 	  if test "$$D" != "x" ; then \
 	    ( cd $$D && echo $$D && $(MAKE) ) ;\
 	    x=$$? ; if [ $$x -ne 0 ]; then exit $$x ; fi \
 	    fi ;\
 	    done
 
 development:
 	@for D in ${PIPELINE_DIRS}; do \
 		 (cd $${D} && ${MAKE} development;) \
 	done
 
 beta:
 	@for D in ${PIPELINE_DIRS}; do \
 		(cd $${D} && ${MAKE} beta;) \
 	done
 
 prod: 
 	@for D in ${PIPELINE_DIRS}; do \
 		(cd $${D} && ${MAKE} prod;) \
 	done
 
 clean::
 	echo nothing to clean in hg/encode/