File Changes for hiram
switch to commits view, user indexv261_preview to v261_preview2 (2011-12-13 to 2011-12-20) v261
- src/hg/hgTracks/netTrack.c
- lines changed 3, context: html, text, full: html, text
fixup color problem for chain net caePb3 tracks on ce10
- src/hg/hgTracks/simpleTracks.c
- lines changed 1, context: html, text, full: html, text
fixup color problem for chain net caePb3 tracks on ce10
- src/hg/htdocs/images/phylo/ce10_7way.png
- lines changed 0, context: html, text, full: html, text
7-way diagram for ce10 multiz
- src/hg/makeDb/doc/ce10.txt
- lines changed 833, context: html, text, full: html, text
running a 7-way alignment to eliminate the two broken genomes
- lines changed 53, context: html, text, full: html, text
adding frames creation to the 7-way
- src/hg/makeDb/doc/makeEnsembl.txt
- lines changed 1030, context: html, text, full: html, text
version 65 update done
- lines changed 13, context: html, text, full: html, text
version 65 update dateReference updated
- lines changed 16, context: html, text, full: html, text
indicate which assemblies are updated in v65
- src/hg/makeDb/schema/all.joiner
- lines changed 1, context: html, text, full: html, text
adding gorilla to the xrg definition
- lines changed 17, context: html, text, full: html, text
adding ce10 and related nematodes
- src/hg/makeDb/trackDb/trackDb.chainNet.ra
- lines changed 103, context: html, text, full: html, text
adding tracks chainNetFr3 chainNetOreNil1 cons7way chainNetCaePb3 chainNetCaeSp111 chainNetCaeRem4 chainNetCb4 chainNetCaeJap4 chainNetCaeAng1
- src/hg/makeDb/trackDb/worm/ce10/trackDb.ra
- lines changed 107, context: html, text, full: html, text
adding tracks chainNetFr3 chainNetOreNil1 cons7way chainNetCaePb3 chainNetCaeSp111 chainNetCaeRem4 chainNetCb4 chainNetCaeJap4 chainNetCaeAng1
- src/hg/makeDb/trackDb/worm/trackDb.chainNet.ra
- lines changed 306, context: html, text, full: html, text
adding tracks chainNetFr3 chainNetOreNil1 cons7way chainNetCaePb3 chainNetCaeSp111 chainNetCaeRem4 chainNetCb4 chainNetCaeJap4 chainNetCaeAng1
- lines changed 3, context: html, text, full: html, text
fixup errors in the type chain specifications
- lines changed 51, context: html, text, full: html, text
adding entry for ce10 chain net
- src/hg/utils/automation/EnsGeneAutomate.pm
- lines changed 3, context: html, text, full: html, text
there is a new panTro4 for v65
- src/hg/utils/automation/doEnsGeneUpdate.pl
- lines changed 4, context: html, text, full: html, text
eliminate wget warning: timestamping does nothing in combination with -O. See the manual
- lines changed 1, context: html, text, full: html, text
update to Ensembl peptide fasta header syntax parsing
- src/hg/utils/genomeQuality/genomeQuality.pl
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