File Changes for wong
switch to commits view, user indexv261_preview to v261_preview2 (2011-12-13 to 2011-12-20) v261
- python/lib/ucscgenomics/mkChangeNotes.py
- lines changed 1, context: html, text, full: html, text
modifications for morgan's new ra.py changes
- python/lib/ucscgenomics/ra.py
- lines changed 5, context: html, text, full: html, text
corrected an error in morgan's modification
- lines changed 1, context: html, text, full: html, text
error in making the common set of stanzas, not intersection of self and self, that's just plain wrong
- lines changed 1, context: html, text, full: html, text
corrected backward changes
- src/hg/encode/qaUpdateMetadata/qaUpdateMetadata
- lines changed 2, context: html, text, full: html, text
changed comparison to public vs alpha instead of beta vs alpha
- src/hg/makeDb/doc/encodeDccHg19/wgEncodeOpenChromSynth.release2.notes
- lines changed 128, context: html, text, full: html, text
notes for release2 open chrom synth
- src/hg/makeDb/doc/encodeDccHg19/wgEncodeRikenCage.release2.notes
- lines changed 418, context: html, text, full: html, text
updated notes to reflect the restoring of revoked data
- src/hg/makeDb/trackDb/cv/alpha/cv.ra
- lines changed 18, context: html, text, full: html, text
moved comments out of lines with var val pairs
- lines changed 1, context: html, text, full: html, text
fixed regex to be more stringent
- lines changed 5, context: html, text, full: html, text
fixed some interferon descriptions, uncovered problems
- lines changed 1, context: html, text, full: html, text
forgot to escape the plus last time
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlShortRnaSeq.ra
- lines changed 21, context: html, text, full: html, text
restored missing stanza from public
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibGenotype.ra
- lines changed 29, context: html, text, full: html, text
fixed some metadata issues, added expIds and accessions
- lines changed 5, context: html, text, full: html, text
fixed some metadata issues caused by reloads
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromSynth.ra
- lines changed 9, context: html, text, full: html, text
added in treatment=None values
- lines changed 17, context: html, text, full: html, text
removed unnecessary origAessembly lines
- lines changed 21, context: html, text, full: html, text
added dcc accessions to synth
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeRikenCage.ra
- lines changed 3586, context: html, text, full: html, text
restored missing metaData form public
- lines changed 152, context: html, text, full: html, text
added revoke tags to all the restored metadata
- lines changed 714, context: html, text, full: html, text
removed stanzas from public that have no files left also added in dccaccessions and expids where possible
- lines changed 6, context: html, text, full: html, text
fleshed out replaced message
- lines changed 74, context: html, text, full: html, text
cleaned up the restored stanzas, there were many errors
- lines changed 1340, context: html, text, full: html, text
Revert "Removing the clusters again, we are getting new ones"
This reverts commit 09d9948a9918c35ecb5ffe6ba9b2cdd4a12853e6.
- lines changed 1267, context: html, text, full: html, text
re-removed clusters from fresh file
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwDnase.ra
- lines changed 1837, context: html, text, full: html, text
metadata for batch job
- src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeBroadHistone.ra
- lines changed 11, context: html, text, full: html, text
filled in the rest of the dccAccessions
- src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeCshlShortRnaSeq.ra
- lines changed 40, context: html, text, full: html, text
rebuilt the beta.mdb.ra for cshl short's metaData update
- src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeRikenCage.ra
- lines changed 5445, context: html, text, full: html, text
remade the beta.mdb.ra for riken for dccaccession push
- src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra
- lines changed 1, context: html, text, full: html, text
renamed openchromchip with release tag
- lines changed 1, context: html, text, full: html, text
changed over to release conventions for synth
- src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibGenotype.release2.html
- src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibGenotype.release2.ra
- lines changed 112, context: html, text, full: html, text
added obtained by to the subgroups becuase we have colliding objects without it
- src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.new.ra
- lines changed 1112, context: html, text, full: html, text
renamed openchromchip with release tag
- src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.release2.html
- lines changed 315, context: html, text, full: html, text
added in html for open chrom release 2
- src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.release2.ra
- lines changed 1112, context: html, text, full: html, text
renamed openchromchip with release tag
- lines changed 10, context: html, text, full: html, text
moved progfibro to be near the other fibroblasts
- src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromSynth.new.ra
- lines changed 196, context: html, text, full: html, text
changed over to release conventions for synth
- src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromSynth.release2.html
- lines changed 294, context: html, text, full: html, text
added in html for synth release 2
- lines changed 17, context: html, text, full: html, text
open chrom synth release 2 fixes
- src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromSynth.release2.ra
- lines changed 196, context: html, text, full: html, text
changed over to release conventions for synth
- lines changed 35, context: html, text, full: html, text
pre-qa changes for synth
- lines changed 11, context: html, text, full: html, text
open chrom synth release 2 fixes
- src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.new.html
- src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.new.ra
- lines changed 648, context: html, text, full: html, text
batch loaded submissions
- lines changed 4562, context: html, text, full: html, text
rename to new convention
- src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release4.html
- src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release4.ra
- lines changed 4562, context: html, text, full: html, text
rename to new convention
- lines changed 4, context: html, text, full: html, text
changed html tag, and collapsed cd20 cell lines into one
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