0b6df1bb55673743a9edd4c67c1db3c7a5098414 cline Mon Jan 23 11:16:53 2012 -0800 In response to Redmine #6660, which rightly points out that the table descriptors are outdated where they reference SwissProt protein IDs, updated the table descriptors to indicate that those fields are actually UniProt IDs diff --git src/hg/inc/kgXref.h src/hg/inc/kgXref.h index 79a96d8..52d0a82 100644 --- src/hg/inc/kgXref.h +++ src/hg/inc/kgXref.h @@ -1,32 +1,32 @@ /* kgXref.h was originally generated by the autoSql program, which also * generated kgXref.c and kgXref.sql. This header links the database and * the RAM representation of objects. */ #ifndef KGXREF_H #define KGXREF_H #define KGXREF_NUM_COLS 10 struct kgXref /* Link together a Known Gene ID and a gene alias */ { struct kgXref *next; /* Next in singly linked list. */ char *kgID; /* Known Gene ID */ char *mRNA; /* mRNA ID */ - char *spID; /* SWISS-PROT protein Accession number */ - char *spDisplayID; /* SWISS-PROT display ID */ + char *spID; /* UniProt protein Accession number */ + char *spDisplayID; /* UniProt display ID */ char *geneSymbol; /* Gene Symbol */ char *refseq; /* RefSeq ID */ char *protAcc; /* NCBI protein Accession number */ char *description; /* Description */ char *rfamAcc; /* Rfam accession number */ char *tRnaName; /* Name from the tRNA track */ }; void kgXrefStaticLoad(char **row, struct kgXref *ret); /* Load a row from kgXref table into ret. The contents of ret will * be replaced at the next call to this function. */ struct kgXref *kgXrefLoad(char **row); /* Load a kgXref from row fetched with select * from kgXref * from database. Dispose of this with kgXrefFree(). */