80089f09f8eae7e729c61e8d09fe8267eedf52d7
cline
  Sun Jan 22 18:06:16 2012 -0800
Addressing Redmine bug # 6661 by changing the wording for the chromStart and chromEnd fields to indicate that they correspond to txStart and txEnd respectively for + strand genes, not for all genes
diff --git src/hg/lib/knownCanonical.as src/hg/lib/knownCanonical.as
index 204dce2..94ca72b 100644
--- src/hg/lib/knownCanonical.as
+++ src/hg/lib/knownCanonical.as
@@ -1,10 +1,10 @@
 table knownCanonical
 "Describes the canonical splice variant of a gene"
     (
     string chrom;	"Chromosome"
-    int chromStart;	"Start position (0 based). Corresponds to txStart"
-    int chromEnd;	"End position (non-inclusive). Corresponds to txEnd"
+    int chromStart;	"Start position (0 based). Corresponds to txStart for + strand genes"
+    int chromEnd;	"End position (non-inclusive). Corresponds to txEnd for + strand genes"
     int clusterId;	"Which cluster of transcripts this belongs to in knownIsoforms"
     string transcript;	"Corresponds to knownGene name field."
     string protein;	"SwissProt ID or more recently UCSC ID of associated protein."
     )