Commits for katrina

v262_preview2 to v262_base (2012-01-17 to 2012-01-24) v262

• updating beta metadata with revised freeze date, #4461, #6577
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeUwTfbs.ra - lines changed 286, context: html, text, full: html, text
• preparing to release ENCODE UW CTCF Binding (release 2), 4461
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeUwTfbs.ra - lines changed 10753, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
• removing html lines because they were pointing at the wrong file name and they are not necessary as long as the .ra and .html have the same names; this will reinstate the description pages
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release4.ra - lines changed 1, context: html, text, full: html, text
• adding in correct html line, do need it since make only looks at first section before the '.'
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release4.ra - lines changed 1, context: html, text, full: html, text
• adding information about the udpate to the release 3 which removes the Monocytes-CD14+ data from the track, redmine 6084
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release3.html - lines changed 5, context: html, text, full: html, text
• adding paragaph tags to improve spacing on edit just made, redmine 6084
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release3.html - lines changed 2, context: html, text, full: html, text
• fixing html line since it was refering to a .html that doesn't exist
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwHistone.patch.ra - lines changed 1, context: html, text, full: html, text
• releasing fix to Monocyte CD14+ matrix label, redmine #6290
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwHistone.release2.ra - lines changed 1, context: html, text, full: html, text
• releasing dropping of CD14+ monocytes from release 3, redmine 6084
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeUwDnase.ra - lines changed 66, context: html, text, full: html, text
• releasing dropping of CD14+ monocytes from release 3, redmine 6084
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release3.ra - lines changed 18, context: html, text, full: html, text
• staging HAIB Genotype Release 2 on beta, redmine #5699
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeHaibGenotype.ra - lines changed 57, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
• preparing to release HAIB Genotype (Release 2), redmine #5699
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeHaibGenotype.ra - lines changed 57, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
• updated some records with new freeze date according to redmine #6581 before releasing track, #5699
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeHaibGenotype.ra - lines changed 8, context: html, text, full: html, text
• staging Gencode V10 on beta. #6230
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/makefile - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeGencodeV10.ra - lines changed 312, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 1, context: html, text, full: html, text
• editing for consistency and a typo, redmine #6230
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV10.html - lines changed 20, context: html, text, full: html, text
• fixing all caps instances of Ensembl, redmine #6230
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV10.html - lines changed 3, context: html, text, full: html, text