235301fd42a93e1ba15678074735ca2ce7ffe3d6
Merge parents caa4f9e ffae904
tdreszer
  Fri Dec 2 11:08:58 2011 -0800
Merge branch 'master' into tdreszer-subCfg
diff --cc src/hg/lib/pal.c
index 719a00d,2e86497..90c4598
--- src/hg/lib/pal.c
+++ src/hg/lib/pal.c
@@@ -1,40 -1,39 +1,39 @@@
  #include "common.h"
  #include "hash.h"
  #include "cart.h"
  #include "genePred.h"
  #include "genePredReader.h"
  #include "mafGene.h"
  #include "trackDb.h"
  #include "hdb.h"
  #include "hgMaf.h"
  #include "jsHelper.h"
  #include "hPrint.h"
  #include "hdb.h"
  
- static char const rcsid[] = "$Id: pal.c,v 1.14 2009/07/06 17:43:08 braney Exp $";
  
 -#define hgtaCGIGeneMafTable "hgta_mafGeneMafTable" 
 -#define hgtaJSGeneMafTable  "mafGeneMafTable" 
 -#define hgtaCGIGeneExons "hgta_mafGeneExons" 
 -#define hgtaJSGeneExons  "mafGeneExons" 
 -#define hgtaCGIGeneNoTrans "hgta_mafGeneNoTrans" 
 -#define hgtaJSGeneNoTrans  "mafGeneNoTrans" 
 -#define hgtaCGIGeneOutBlank "hgta_mafGeneOutBlank" 
 -#define hgtaJSGeneOutBlank  "mafGeneOutBlank" 
 -#define hgtaCGIOutTable "hgta_mafOutTable" 
 -#define hgtaJSOutTable  "mafOutTable" 
 +#define hgtaCGIGeneMafTable "hgta_mafGeneMafTable"
 +#define hgtaJSGeneMafTable  "mafGeneMafTable"
 +#define hgtaCGIGeneExons "hgta_mafGeneExons"
 +#define hgtaJSGeneExons  "mafGeneExons"
 +#define hgtaCGIGeneNoTrans "hgta_mafGeneNoTrans"
 +#define hgtaJSGeneNoTrans  "mafGeneNoTrans"
 +#define hgtaCGIGeneOutBlank "hgta_mafGeneOutBlank"
 +#define hgtaJSGeneOutBlank  "mafGeneOutBlank"
 +#define hgtaCGIOutTable "hgta_mafOutTable"
 +#define hgtaJSOutTable  "mafOutTable"
  #define hgtaCGINumColumns "hgta_mafNumColumns"
  #define hgtaJSNumColumns  "mafNumColumns"
  #define hgtaCGITruncHeader "hgta_mafTruncHeader"
  #define hgtaJSTruncHeader  "mafTruncHeader"
  
  static char *curVars[] = {
  	hgtaCGIGeneMafTable, hgtaCGIGeneExons,
  	hgtaCGIGeneNoTrans, hgtaCGIGeneOutBlank,
  	hgtaCGIOutTable, hgtaCGINumColumns,
  	hgtaCGITruncHeader,
  	};
  
  int palOutPredList(struct sqlConnection *conn, struct cart *cart,
      struct genePred *list)
  /* output a list of genePreds in pal format */