29cda3bb2fb4fa07a300e12de17ba83377706a65
tdreszer
  Fri Jul 29 17:54:52 2011 -0700
More incremental changes before i most switch back to the master brqanch
diff --git src/hg/js/hui.js src/hg/js/hui.js
index b5b43a0..4f274b0 100644
--- src/hg/js/hui.js
+++ src/hg/js/hui.js
@@ -1,2045 +1,2110 @@
 // JavaScript Especially for hui.c
 // $Header: /projects/compbio/cvsroot/kent/src/hg/js/hui.js,v 1.59 2010/06/03 20:27:26 tdreszer Exp $
 
 var compositeName = "";
 //var browser;                // browser ("msie", "safari" etc.)
 //var now = new Date();
 //var start = now.getTime();
 //$(window).load(function () {
 //    if(start != null) {
 //        now = new Date();
 //        alert("Loading took "+(now.getTime() - start)+" msecs.");
 //    }
 //});
 
 
 // The 'mat*' functions are especially designed to support subtrack configuration by 2D matrix of controls
 
 function _matSelectViewForSubTracks(obj,view)
 {
 // viewDD:onchange Handle any necessary changes to subtrack checkboxes when the view changes
 // views are "select" drop downs on a subtrack configuration page
     var classesHidden = ""; // Needed for later
 
     if( obj.selectedIndex == 0) { // hide
         matSubCBsEnable(false,view);
         hideConfigControls(view);
 
         // Needed for later
         classesHidden = matViewClasses('hidden');
         classesHidden = classesHidden.concat( matAbcCBclasses(false) );
     } else {
         // Make main display dropdown show full if currently hide
         compositeName = obj.name.substring(0,obj.name.indexOf(".")); // {trackName}.{view}.vis
         exposeAll();
         matSubCBsEnable(true,view);
 
         // Needed for later
         classesHidden = matViewClasses('hidden');
         classesHidden = classesHidden.concat( matAbcCBclasses(false) );
 
         // If hide => show then check all subCBs matching view and matCBs
         // If show => show than just enable subCBs for the view.
         if (obj.lastIndex == 0) { // From hide to show
             // If there are matCBs then we will check some subCBs if we just went from hide to show
             var matCBs = $("input.matCB:checked");
             if (matCBs.length > 0) {
                 // Get list of all checked abc classes first
                 var classesAbcChecked = new Array();
                 matCBs.filter(".abc").each( function (i) {
                     var classList = $( this ).attr("class").split(" ");
                     classesAbcChecked.push( aryRemove(classList,"matCB","halfVis","abc") );
                 });
 
                 // Walk through checked non-ABC matCBs and sheck related subCBs
                 var subCBs = $("input.subCB").filter("."+view).not(":checked");
                 matCBs.not(".abc").each( function (i) {
                     var classList = $( this ).attr("class").split(" ");
                     classList = aryRemove(classList,"matCB","halfVis");
                     var subCBsMatching = objsFilterByClasses(subCBs,"and",classList);
                     if (classesAbcChecked.length>0)
                         subCBsMatching = objsFilterByClasses(subCBsMatching,"or",classesAbcChecked);
                     // Check the subCBs that belong to this view and checked matCBs
                     subCBsMatching.each( function (i) {
                         this.checked = true;
                         matSubCBsetShadow(this);
                         hideOrShowSubtrack(this);
                     });
                 });
             } // If no matrix, then enabling is all that was needed.
 
             // fix 3-way which may need to go from unchecked to .halfVis
             var matCBs = $("input.matCB").not(".abc").not(".halfVis").not(":checked");
             if(matCBs.length > 0) {
                 $( matCBs ).each( function (i) { matChkBoxNormalize( this, classesHidden ); });
             }
         }
     }
     // fix 3-way matCBs which may need to go from halfVis to checked or unchecked depending
     var matCBs = $("input.matCB").not(":checked").not(".halfVis");
     var matCBs = matCBsWhichAreComplete(false);
     if(matCBs.length > 0) {
         if($("select.viewDD").not("[selectedIndex=0]").length = 0) { // No views visible so nothing is inconsistent
             $( matCBs ).each( function (i) { matCbComplete( this, true ); });
         } else {
             $( matCBs ).each( function (i) { matChkBoxNormalize( this, classesHidden ); });
         }
     }
     matSubCBsSelected();
     obj.lastIndex = obj.selectedIndex;
 }
 
 function matSelectViewForSubTracks(obj,view)
 {
     waitOnFunction( _matSelectViewForSubTracks, obj,view);
 }
 
 function exposeAll()
 {
     // Make main display dropdown show full if currently hide
     var visDD = $("select.visDD"); // limit to hidden
     if ($(visDD).length == 1 && $(visDD).attr('selectedIndex') == 0)   // limit to hidden
         $(visDD).attr('selectedIndex',$(visDD).children('option').length - 1);
 }
 
 function matSubCbClick(subCB)
 {
 // subCB:onclick  When a subtrack checkbox is clicked, it may result in
 // Clicking/unclicking the corresponding matrix CB.  Also the
 // subtrack may be hidden as a result.
     matSubCBsetShadow(subCB);
     hideOrShowSubtrack(subCB);
     // When subCBs are clicked, 3-state matCBs may need to be set
     var classes = matViewClasses('hidden');
     classes = classes.concat( matAbcCBclasses(false) );
     var matCB = matCbFindFromSubCb( subCB );
     if( matCB != undefined ) {
         matChkBoxNormalize( matCB, classes );
     }
     //var abcCB = matAbcCbFindFromSubCb( subCB );
     //if( abcCB != undefined ) {
     //    matChkBoxNormalize( abcCB, classes );
     //}
 
     if(subCB.checked)
         exposeAll();  // Unhide composite vis?
 
-    var subtrackName = subCB.name;
-    if (subtrackName == undefined || subtrackName.length == 0)
-        subtrackName = subCB.id;
-    if (subtrackName != undefined && subtrackName.length > 0) {
-        subtrackName = subtrackName.substring(0,subtrackName.length - 4); // '_sel'.length
-        scm.enableCfg(subCB,subtrackName,subCB.checked);
-    }
+    scm.enableCfg(subCB,null,subCB.checked);
 
     matSubCBsSelected();
 }
 
 function matCbClick(matCB)
 {
 // matCB:onclick  When a matrix CB is clicked, the set of subtracks checked may change
 // Also called indirectly by matButton:onclick via matSetMatrixCheckBoxes
 
     var classList = $( matCB ).attr("class").split(" ");
     var isABC = (aryFind(classList,"abc") != -1);
     classList = aryRemove(classList,"matCB","halfVis","abc");
     if(classList.length == 0 )
        matSubCBsCheck(matCB.checked);
     else if(classList.length == 1 )
        matSubCBsCheck(matCB.checked,classList[0]);               // dimX or dimY or dim ABC
     else if(classList.length == 2 )
        matSubCBsCheck(matCB.checked,classList[0],classList[1]);  // dimX and dimY
     else
         warn("ASSERT in matCbClick(): There should be no more than 2 entries in list:"+classList)
 
     if(!isABC)
         matCbComplete(matCB,true); // No longer partially checked
 
     if(isABC) {  // if dim ABC then we may have just made indeterminate X and Ys determinate
         if(matCB.checked == false) { // checking new dim ABCs cannot change indeterminate state.   IS THIS TRUE ?  So far.
             var matCBs = matCBsWhichAreComplete(false);
             if(matCBs.length > 0) {
                 if($("input.matCB.abc:checked").length == 0) // No dim ABC checked, so leave X&Y checked but determined
                     $( matCBs ).each( function (i) { matCbComplete( this, true ); });
                 else {
                     var classes = matViewClasses('hidden');
                     classes = classes.concat( matAbcCBclasses(false) );
                     $( matCBs ).each( function (i) { matChkBoxNormalize( this, classes ); });
                 }
             }
         }
     }
 
     if(matCB.checked)
         exposeAll();  // Unhide composite vis?
     matSubCBsSelected();
 }
 
 function _matSetMatrixCheckBoxes(state)
 {
 // matButtons:onclick Set all Matrix checkboxes to state.  If additional arguments are passed in, the list of CBs will be narrowed by the classes
     //jQuery(this).css('cursor', 'wait');
     var matCBs = $("input.matCB").not(".abc");
     for(var vIx=1;vIx<arguments.length;vIx++) {
         matCBs = $( matCBs ).filter("."+arguments[vIx]);  // Successively limit list by additional classes.
     }
     $( matCBs ).each( function (i) {
         this.checked = state;
         matCbComplete(this,true);
     });
     subCbs = $("input.subCB");
     for(var vIx=1;vIx<arguments.length;vIx++) {
         subCbs = $( subCbs ).filter("."+arguments[vIx]);  // Successively limit list by additional classes.
     }
     if(state) { // If clicking [+], further limit to only checked ABCs
         var classes = matAbcCBclasses(false);
         subCbs = objsFilterByClasses(subCbs,"not",classes);  // remove unchecked abcCB classes
     }
     $( subCbs ).each( function (i) {
         this.checked = state;
         matSubCBsetShadow(this);
     });
     if(state)
         exposeAll();  // Unhide composite vis?
     showOrHideSelectedSubtracks();
     matSubCBsSelected();
     //jQuery(this).css('cursor', '');
 
     var tbody = $( subCbs[0] ).parents('tbody.sorting');
     if (tbody != undefined)
          $(tbody).removeClass('sorting');
     return true;
 }
 function matSetMatrixCheckBoxes(state)
 {
     var tbody = $( 'tbody.sortable');
     if (tbody != undefined)
          $(tbody).addClass('sorting');
 
     if (arguments.length >= 5)
         waitOnFunction(_matSetMatrixCheckBoxes,state,arguments[1],arguments[2],arguments[3],arguments[4]);
     else if (arguments.length >= 4)
         waitOnFunction(_matSetMatrixCheckBoxes,state,arguments[1],arguments[2],arguments[3]);
     else if (arguments.length >= 3)
         waitOnFunction(_matSetMatrixCheckBoxes,state,arguments[1],arguments[2]);
     else if (arguments.length >= 2)
         waitOnFunction(_matSetMatrixCheckBoxes,state,arguments[1]);
     else
         waitOnFunction(_matSetMatrixCheckBoxes,state);
 
 }
 
 ///////////// CB support routines ///////////////
 // Terms:
 // viewDD - view drop-down control
 // matButton: the [+][-] button controls associated with the matrix
 // matCB - matrix dimX and dimY CB controls (in some cases this set contains abcCBs as well because they are part of the matrix)
 // abcCB - matrix dim (ABC) CB controls
 // subCB - subtrack CB controls
 // What does work
 // 1) 4 state subCBs: checked/unchecked enabled/disabled (which is visible/hidden)
 // 2) 3 state matCBs for dimX and Y but not for Z (checked,unchecked,indeterminate (incomplete set of subCBs for this matCB))
 // 3) cart vars for viewDD, abcCBs and subCBs but matCBs set by the state of those 3
 // What is awkward or does not work
 // A) Awkward: matCB could be 5 state (all,none,subset,superset,excusive non-matching set)
 function matSubCBsCheck(state)
 {
 // Set all subtrack checkboxes to state.  If additional arguments are passed in, the list of CBs will be narrowed by the classes
 // called by matCB clicks (matCbClick()) !
     var subCBs = $("input.subCB");
     for(var vIx=1;vIx<arguments.length;vIx++) {
         subCBs = subCBs.filter("."+arguments[vIx]);  // Successively limit list by additional classes.
     }
 
     if(state) { // If checking subCBs, then make sure up to 3 dimensions of matCBs agree with each other on subCB verdict
         var classes = matAbcCBclasses(false);
         subCBs = objsFilterByClasses(subCBs,"not",classes);  // remove unchecked abcCB classes
         if(arguments.length == 1 || arguments.length == 3) { // Requested dimX&Y: check dim ABC state
             $( subCBs ).each( function (i) { matSubCBcheckOne(this,state); });
         } else {//if(arguments.length == 2) { // Requested dim ABC (or only 1 dimension so this code is harmless)
             var matXY = $("input.matCB").not(".abc");  // check X&Y state
             matXY = $( matXY ).filter(":checked");
             for(var mIx=0;mIx<matXY.length;mIx++) {
                 var classes = $(matXY[mIx]).attr("class").split(' ');
                 classes = aryRemove(classes,"matCB","halfVis");
                 $( subCBs ).filter('.'+classes.join(".")).each( function (i) { matSubCBcheckOne(this,state); });
             }
         }
     } else  // state not checked so no filtering by other matCBs needed
         subCBs.each( function (i) { matSubCBcheckOne(this,state); });
 
     return true;
 }
 
 function matSubCBsEnable(state)
 {
 // Enables/Disables subtracks checkboxes.  If additional arguments are passed in, the list of CBs will be narrowed by the classes
     var subCBs = $("input.subCB");
     for(var vIx=1;vIx<arguments.length;vIx++) {
         if(arguments[vIx].length > 0)
             subCBs = subCBs.filter("."+arguments[vIx]);  // Successively limit list by additional classes.
     }
     subCBs.each( function (i) {
         if(state) {
             $(this).parent().attr('title','');
             $(this).parent().attr('cursor','pointer');
         } else {
             $(this).parent().attr('title','view is hidden');
             $(this).parent().attr('cursor','pointer');
         }
         this.disabled = !state;
         matSubCBsetShadow(this);
         hideOrShowSubtrack(this);
     });
 
     return true;
 }
 
 function matSubCBcheckOne(subCB,state)
 {
 // setting a single subCB may cause it to appear/disappear
     subCB.checked = state;
+    scm.enableCfg(subCB,null,state);
     matSubCBsetShadow(subCB);
     hideOrShowSubtrack(subCB);
 }
 
 function matSubCBsetShadow(subCB)
 {
 // Since CBs only get into cart when enabled/checked, the shadow control enables cart to know other states
     var shadowState = 0;
     if(subCB.checked)
         shadowState = 1;
     if(subCB.disabled)
         shadowState -= 2;
     $("#"+subCB.name+"_4way").val(shadowState);
 }
 
 function matChkBoxNormalize(matCB)
 {
 // Makes sure matCBs are in one of 3 states (checked,unchecked,indeterminate) based on matching set of subCBs
     var classList = $( matCB ).attr("class").split(" ");
     var isABC = (aryFind(classList,"abc") != -1);
     if(isABC)
         alert("ASSERT: matChkBoxNormalize() called for dim ABC!");
     classList = aryRemove(classList,"matCB","halfVis");
 
     var classes = '.' + classList.join(".");// created string filter of classes converting "matCB K562 H3K4me1" as ".K562.H3K4me1"
     var subCBs = $("input.subCB").filter(classes); // All subtrack CBs that match matrix CB
 
     if(arguments.length > 1 && arguments[1].length > 0) { // dim ABC NOT classes
         subCBs = objsFilterByClasses(subCBs,"not",arguments[1]);
     }
 
     // Only look at visible views
     subCBs = $(subCBs).not(":disabled");
 
     if(subCBs.length > 0) {
         var CBsChecked = subCBs.filter(":checked");
         if(!isABC) {
             if(CBsChecked.length == subCBs.length) {
                 matCbComplete(matCB,true);
                 $(matCB).attr('checked',true);
             } else if(CBsChecked.length == 0) {
                 matCbComplete(matCB,true);
                 $(matCB).attr('checked',false);
             } else {
                 matCbComplete(matCB,false);
                 $(matCB).attr('checked',true);
             }
         }
     }
     else
         matCbComplete(matCB,true); // If no subs match then this is determined !
 }
 
 function matCbComplete(matCB,complete)
 {
 // Makes or removes the 3rd (indeterminate) matCB state
     // Too many options:
     // 1) addClass()/removeClass() (which does not directly support title)
     // 2) wrap div which could contain border, color, content.  content is not on one line: size is difficult
     // 3) wrap font which could contain border, color, content.  content is on one line: size is difficult
     // 4) *[ ]* ?[ ]?  *[ ]*  No text seems right;  borders? colors? opacity? Yes, minimum
     if(complete) {
         $(matCB).css('opacity', '1');  // For some reason IE accepts direct change but isn't happy with simply adding class!
         $(matCB).removeClass('halfVis');
         $(matCB).attr("title","");
     } else {
         $(matCB).css('opacity', '0.5');
         $(matCB).addClass('halfVis');
         $(matCB).attr("title","Not all associated subtracks have been selected");
         //$('.halfVis').css('opacity', '0.5');
     }
 }
 
 function matCBsWhichAreComplete(complete)
 {
 // Returns a list of currently indeterminate matCBs.  This is encapsulated to keep consistent with matCbComplete()
     if(complete)
         return $("input.matCB").not(".halfVis");
     else
         return $("input.matCB.halfVis");
 }
 
 function matCbFindFromSubCb(subCB)
 {
 // returns the one matCB associated with a subCB (or undefined)
     var classList =  $( subCB ).attr("class").split(" ");
     // we need one or 2 classes, depending upon how many dimensions in matrix (e.g. "subDB GM10847 NFKB aNone IGGrab Signal")
     classList = aryRemove(classList,"subCB");
     var classes = classList.slice(0,2).join('.');   // How to get only X and Y classes?  Assume they are the first 2
     var matCB = $("input.matCB."+classes); // Note, this works for filtering multiple classes because we want AND
     if(matCB.length == 1)
         return matCB;
 
     matCB = $("input.matCB."+classList[0]); // No hit so this must be a 1D matrix
     if(matCB.length == 1)
         return matCB;
 
     return undefined;
 }
 
 function matAbcCBfindFromSubCb(subCB)
 {
 // returns the abcCBs associated with a subCB (or undefined)
     var abcCBs = $("input.matCB.abc");
     if( abcCBs.length > 0 ) {
         var classList =  $( subCB ).attr("class").split(" ");
         classList = aryRemove(classList,"subCB");
         classList.shift(); // Gets rid of X and Y associated classes (first 2 after subCB)
         classList.shift();
         classList.pop();   // gets rid of view associated class (at end)
         if(classList.length >= 1) {
             var abcCB = $(abcCBs).filter('.'+classList.join("."));
             if(abcCB.length >= 1)
                 return abcCB;
         }
     }
     return undefined;
 }
 
 function objsFilterByClasses(objs,keep,classes)
 {
 // Accepts an obj list and an array of classes, then filters successively by that list
     if( classes != undefined && classes.length > 0 ) {
         if(keep == "and") {
             objs = $( objs ).filter( '.' + classes.join('.') ); // Must belong to all
         } else if(keep == "or") {
             objs = $( objs ).filter( '.' + classes.join(',.') ); // Must belong to one or more
         } else if(keep == "not") {
             for(var cIx=classes.length-1;cIx>-1;cIx--) {
                 objs = $( objs ).not( '.' + classes[cIx] ); // not('class1.class2') is different from not('.class1').not('.class2')
             }
         }
     }
     return objs;
 }
 
 function matViewClasses(limitTo)
 {
 // returns an array of classes from the ViewDd: converts "viewDD normalText SIG"[]s to "SIG","zRAW"
     var classes = new Array;
     var viewDDs = $("select.viewDD");//.filter("[selectedIndex='0']");
     if(limitTo == 'hidden') {
         viewDDs = $(viewDDs).filter("[selectedIndex=0]");
     } else if(limitTo == 'visible') {
         viewDDs = $(viewDDs).not("[selectedIndex=0]");
     }
     $(viewDDs).each( function (i) {
         var classList = $( this ).attr("class").split(" ");
         classList = aryRemove(classList,"viewDD","normalText");
         classes.push( classList[0] );
     });
     return classes;
 }
 
 function matAbcCBclasses(wantSelected)
 {// returns an array of classes from the dim ABC CB classes: converts "matCB abc rep1"[]s to "rep1","rep2"
     var classes = new Array;
     var abcCBs = $("input.matCB.abc");
     if(abcCBs.length > 0) {
         if (!wantSelected) {
             abcCBs = abcCBs.not(":checked");
         } else {
             abcCBs = abcCBs.filter(":checked");
         }
         $(abcCBs).each( function (i) {
             var classList = $( this ).attr("class").split(" ");
             classList = aryRemove(classList,"matCB","abc");
             classes.push( classList[0] );
         });
     } else { // No abcCBs so look for filterBox classes
         return filterCompositeClasses(wantSelected);
     }
     return classes;
 }
 
 function matSubCBsSelected()
 {
 // Displays visible and checked track count
     var counter = $('.subCBcount');
     if(counter != undefined) {
         var subCBs =  $("input.subCB");
         $(counter).text($(subCBs).filter(":enabled:checked").length + " of " +$(subCBs).length+ " selected");
     }
 }
 
 /////////////////// subtrack configuration support ////////////////
 function compositeCfgUpdateSubtrackCfgs(inp)
 {
 // Updates all subtrack configuration values when the composite cfg is changed
     // If view association then find it:
     var view = "";
     var daddy = $(inp).parents(".blueBox");
     if(daddy.length == 1) {
         var classList = $(daddy[0]).attr("class").split(" ");
         if(classList.length == 2) {
             view = classList[1];
         }
     }
     var suffix = inp.name.substring(inp.name.indexOf("."));  // Includes '.'
     //if(suffix.length==0)
     //    suffix = inp.name.substring(inp.name.indexOf("_"));
     if(suffix.length==0) {
         warn("Unable to parse '"+inp.name+"'");
         return true;
     }
     if(inp.type.indexOf("select") == 0) {
         var list = $("select[name$='"+suffix+"']").not("[name='"+inp.name+"']"); // Exclude self from list
         if(view != "") { list =  $(list).filter(function(index) { return $(this).parents(".blueBox." + view).length == 1; });}
         if($(list).length>0) {
             if(inp.multiple != true)
                 $(list).attr('selectedIndex',inp.selectedIndex);
             else {
                 $(list).each(function(view) {  // for all dependent (subtrack) multi-selects
                     sel = this;
                     if(view != "") {
                         var hasClass = $(this).parents(".blueBox." + view);
                         if(hasClass.length != 0)
                             return;
                     }
                     $(this).children('option').each(function() {  // for all options of dependent mult-selects
                         $(this).attr('selected',$(inp).children('option:eq('+this.index+')').attr('selected')); // set selected state to independent (parent) selected state
                     });
                     $(this).attr('size',$(inp).attr('size'));
                 });
             }
         }
     }
     else if(inp.type.indexOf("checkbox") == 0) {
         var list = $("checkbox[name$='"+suffix+"']").not("[name='"+inp.name+"']"); // Exclude self from list
         if(view != "") { list =  $(list).filter(function(index) { return $(this).parents(".blueBox." + view).length == 1; });}
         if($(list).length>0)
             $(list).attr("checked",$(inp).attr("checked"));
     }
     else if(inp.type.indexOf("radio") == 0) {
         var list = $("input:radio[name$='"+suffix+"']").not("[name='"+inp.name+"']");
         list = $(list).filter("[value='"+inp.value+"']")
         if(view != "") { list =  $(list).filter(function(index) { return $(this).parents(".blueBox." + view).length == 1; });}
         if($(list).length>0)
             $(list).attr("checked",true);
     }
     else {  // Various types of inputs
         var list = $("input[name$='"+suffix+"']").not("[name='"+inp.name+"']");//.not("[name^='boolshad.']"); // Exclude self from list
         if(view != "") { list =  $(list).filter(function(index) { return $(this).parents(".blueBox." + view).length == 1; });}
         if($(list).length>0)
             $(list).val(inp.value);
         //else {
         //    alert("Unsupported type of multi-level cfg setting type='"+inp.type+"'");
         //    return false;
         //}
     }
     return true;
 }
 
 function compositeCfgRegisterOnchangeAction(prefix)
 {
 // After composite level cfg settings written to HTML it is necessary to go back and
 // make sure that each time they change, any matching subtrack level cfg setting are changed.
     var list = $("input[name^='"+prefix+".']").not("[name$='.vis']");
     $(list).change(function(){compositeCfgUpdateSubtrackCfgs(this);});
 
     var list = $("select[name^='"+prefix+".']").not("[name$='.vis']");
     $(list).change(function(){compositeCfgUpdateSubtrackCfgs(this);});
 }
 
 function visTriggersHiddenSelect(obj)
 { // SuperTrack child changing vis should trigger superTrack reshaping.
   // This is done by setting hidden input "_sel"
     var trackName_Sel = $(obj).attr('name') + "_sel";
     var theForm = $(obj).closest("form");
     var visible = (obj.selectedIndex != 0);
     if (visible) {
         updateOrMakeNamedVariable(theForm,trackName_Sel,"1");
     } else
         disableNamedVariable(theForm,trackName_Sel);
     return true;
 }
 
 function subtrackCfgHideAll(table)
 {
 // hide all the subtrack configuration stuff
     $("div[id $= '_cfg']").each( function (i) {
         $( this ).css('display','none');
         $( this ).children("input[name$='.childShowCfg']").val("off");
     });
     // Hide all "..." metadata displayed
     $("div[id $= '_meta']:visible").toggle();
     $("img[src$='../images/upBlue.png']").attr('src','../images/downBlue.png');
 }
 
 var popUpTrackName;
 var popUpTitle = "";
 var popSaveAllVars = null;
 function popUpCfgOk(popObj, trackName)
 { // Kicks off a Modal Dialog for the provided content.
     var allVars = getAllVars(popObj, trackName );   // always subtrack cfg
     var changedVars = varHashChanges(allVars,popSaveAllVars);
     //warn("cfgVars:"+varHashToQueryString(changedVars));
     setVarsFromHash(changedVars);
     var newVis = changedVars[trackName];
     if(newVis != null) {
         var sel = $('input[name="'+trackName+'_sel"]:checkbox');
         var checked = (newVis != 'hide' && newVis != '[]');  // subtracks do not have "hide", thus '[]'
         if( $(sel) != undefined ) {
             $(sel).each( function (i) { matSubCBcheckOne(this,checked); });  // Though there is only one, the each works but the direct call does not!
             matSubCBsSelected();
         }
     }
 }
 
 function popUpCfg(content, status)
 { // Kicks off a Modal Dialog for the provided content.
     // Set up the modal dialog
     var popit = $('#popit');
     $(popit).html("<div style='font-size:80%'>" + content + "</div>");
     $(popit).dialog({
         ajaxOptions: { cache: true }, // This doesn't work
         resizable: false,
         height: 'auto',
         width: 'auto',
         minHeight: 200,
         minWidth: 700,
         modal: true,
         closeOnEscape: true,
         autoOpen: false,
         buttons: { "OK": function() {
             popUpCfgOk(this,popUpTrackName);
             $(this).dialog("close");
         }},
         open: function() { popSaveAllVars = getAllVars( this, popUpTrackName ); }, // always subtrack cfg
         close: function() { $('#popit').empty(); }
     });
     // Apparently the options above to dialog take only once, so we set title explicitly.
     if(popUpTitle != undefined && popUpTitle.length > 0)
         $(popit).dialog('option' , 'title' , popUpTitle );
     else
         $(popit).dialog('option' , 'title' , "Please Respond");
     $(popit).dialog('open');
 }
 
 function _popUpSubrackCfg(trackName,label)
 { // popup cfg dialog
     popUpTrackName = trackName;
     popUpTitle = label;
 
     $.ajax({
         type: "GET",
         url: "../cgi-bin/hgTrackUi?ajax=1&g=" + trackName + "&hgsid=" + getHgsid() + "&db=" + getDb(),
         dataType: "html",
         trueSuccess: popUpCfg,
         success: catchErrorOrDispatch,
         error: errorHandler,
         cmd: "cfg",
         cache: false
     });
 }
 
 function popUpSubtrackCfg(trackName,label)
 {
     waitOnFunction( _popUpSubrackCfg, trackName, label );  // Launches the popup but shields the ajax with a waitOnFunction
     return false;
 }
 
 function subtrackCfgShow(tableName)
 {
 // Will show subtrack specific configuration controls
 // Config controls not matching name will be hidden
     var divit = $("#div_"+tableName+"_cfg");
     if(($(divit).css('display') == 'none')
     && metadataIsVisible(tableName))
         metadataShowHide(tableName,"","");
 
     // Could have all inputs commented out, then uncommented when clicked:
     // But would need to:
     // 1) be able to find composite view level input
     // 2) know if subtrack input is non-default (if so then subtrack value overrides composite view level value)
     // 3) know whether so composite view level value has changed since hgTrackUi displayed (if so composite view level value overrides)
     $(divit).toggle();
     return false;
 }
 
 function enableViewCfgLink(enable,view)
 {
 // Enables or disables a single configuration link.
     var link = $('#a_cfg_'+view);
     if(enable)
         $(link).attr('href','#'+$(link).attr('id'));
     else
         $(link).removeAttr('href');
 }
 
 function enableAllViewCfgLinks()
 {
     $( ".viewDD").each( function (i) {
         var view = this.name.substring(this.name.indexOf(".") + 1,lastIndexOf(".vis"));
         enableViewCfgLink((this.selectedIndex > 0),view);
     });
 }
 
 function hideConfigControls(view)
 {
 // Will hide the configuration controls associated with one name
     $("input[name$='"+view+".showCfg']").val("off");      // Set cart variable
     $("tr[id^='tr_cfg_"+view+"']").css('display','none'); // Hide controls
 }
 
 function showConfigControls(name)
 {
 // Will show configuration controls for name= {tableName}.{view}
 // Config controls not matching name will be hidden
     var trs  = $("tr[id^='tr_cfg_']")
     $("input[name$='.showCfg']").val("off"); // Turn all off
     $( trs ).each( function (i) {
         if( this.id == 'tr_cfg_'+name && this.style.display == 'none') {
             $( this ).css('display','');
 	    $("input[name$='."+name+".showCfg']").val("on");
         }
         else if( this.style.display == '') {
             $( this ).css('display','none');
         }
     });
 
     // Close the cfg controls in the subtracks
     $("table.subtracks").each( function (i) { subtrackCfgHideAll(this);} );
     return true;
 }
 
 function showOrHideSelectedSubtracks(inp)
 {
 // Show or Hide subtracks based upon radio toggle
     var showHide;
     if(arguments.length > 0)
         showHide=inp;
     else {
         var onlySelected = $("input[name='displaySubtracks']");
         if(onlySelected.length > 0)
             showHide = onlySelected[0].checked;
         else
             return;
     }
     showSubTrackCheckBoxes(showHide);
 
     var tbody = $("tbody.sortable")
     $(tbody).each(function (i) {
         sortedTableAlternateColors(this);
     });
 }
 
 ///// Following functions called on page load
 function matInitializeMatrix()
 {
 // Called at Onload to coordinate all subtracks with the matrix of check boxes
 //var start = startTiming();
 jQuery('body').css('cursor', 'wait');
     if (document.getElementsByTagName) {
         matSubCBsSelected();
         showOrHideSelectedSubtracks();
     }
 jQuery('body').css('cursor', '');
 //showTiming(start,"matInitializeMatrix()");
 }
 
 function multiSelectLoad(div,sizeWhenOpen)
 {
     //var div = $(obj);//.parent("div.multiSelectContainer");
     var sel = $(div).children("select:first");
     if(div != undefined && sel != undefined && sizeWhenOpen <= $(sel).length) {
         $(div).css('width', ( $(sel).clientWidth ) +"px");
         $(div).css('overflow',"hidden");
         $(div).css('borderRight',"2px inset");
     }
     $(sel).show();
 }
 
 function multiSelectCollapseToSelectedOnly(obj)
 {
     var items = $(obj).children("option");
     if(items.length > 0) {
         $(items).not(":selected").hide();
     }
     $(obj).attr("size",$(items).filter(":selected").length);
 }
 
 function multiSelectBlur(obj)
 { // Closes a multiselect and colapse it to a single option when appropriate
     if($(obj).val() == undefined || $(obj).val() == "") {
         $(obj).val("All");
         $(obj).attr('selectedIndex',0);
     }
     //if(obj.value == "All") // Close if selected index is 1
     if($(obj).attr('selectedIndex') == 0) // Close if selected index is 1
         $(obj).attr('size',1);
     else
         multiSelectCollapseToSelectedOnly(obj);
 
     /*else if($.browser.msie == false && $(obj).children('option[selected]').length==1) {
         var ix;
         for(ix=0;ix<obj.options.length;ix++) {
             if(obj.options[ix].value == obj.value) {
                 //obj.options[ix].selected = true;
                 obj.selectedIndex = ix;
                 obj.size=1;
                 $(obj).trigger('change');
                 break;
             }
         }
     }*/
 }
 
 function filterCompositeSet(obj,all)
 { // Will set all filter composites via [+] or [-] buttons
 
     matSubCBsCheck(all);
     var vars = [];
     var vals = [];
     var filterComp = $("select.filterComp");
     if(all) {
         $(filterComp).each(function(i) {
             $(this).trigger("checkAll");
             $(this).val("All");
             //vars.push($(this).attr('name'));  // Don't bother ajaxing this over
             //vals.push($(this).val());
         });
     } else {
         $(filterComp).each(function(i) {
             $(this).trigger("uncheckAll");
             $(this).val("");
             vars.push($(this).attr('name'));
             vals.push("[empty]");
         });
     }
     if(vars.length > 0) {
         setCartVars(vars,vals);// FIXME: setCartVar conflicts with "submit" button paradigm
     }
     matSubCBsSelected(); // Be sure to update the counts!
 }
 
 function matCbFilterClasses(matCb,joinThem)
 { // returns the var associated with a filterComp
 
     var classes = $( matCb ).attr("class").split(" ");
     classes = aryRemove(classes,"matCB","halfVis","abc");
     if (joinThem)
         return '.' + classes.join('.');
     return classes;
 }
 
 function filterCompFilterVar(filter)
 { // returns the var associated with a filterComp
 
     if($(filter).hasClass('filterComp') == false)
         return undefined;
 
     // Find the var for this filter
     var parts = $(filter).attr("name").split('.');
     return parts[parts.length - 1];
 }
 
 function filterCompApplyOneFilter(filter,subCbsRemaining)
 { // Applies a single filter to a filterTables TRs
     var classes = $(filter).val();
     if (classes == null || classes.length == 0)
         return []; // Nothing selected so exclude all rows
 
     if(classes[0] == 'All')
         return subCbsRemaining;  // nothing excluded by this filter
 
     var subCbsAccumulating = [];
     for(var ix =0;ix<classes.length;ix++) {
         var subCBOneFIlter = $(subCbsRemaining).filter('.' + classes[ix]);
         if (subCBOneFIlter.length > 0)
             subCbsAccumulating = jQuery.merge( subCbsAccumulating, subCBOneFIlter );
     }
     //warnSince('filterCompApplyOneFilter('+filterCompFilterVar(filter)+','+subCbsRemaining.length+')');
     return subCbsAccumulating;
 }
 
 function filterCompApplyOneMatCB(matCB,remainingCBs)
 { // Applies a single filter to a filterTables TRs
     var classes = matCbFilterClasses(matCB,true);
     if (classes == null || classes.length == 0)
         return []; // Nothing selected so exclude all rows
 
     //warnSince('filterCompApplyOneMatCB('+classes+','+remainingCBs.length+');
     return $(remainingCBs).filter(classes);
 }
 
 function filterCompSubCBsSurviving(filterClass)
 // returns a list of trs that satisfy all filters
 // If defined, will exclude filter identified by filterClass
 {
     // find all filterable table rows
     var subCbsFiltered = $("input.subCB");// Default all
     if (subCbsFiltered.length == 0)
         return [];
 
     //warnSince('filterCompSubCBsSurviving() start: '+ subCbsFiltered.length);
 
     // Find all filters
     var filters = $("select.filterComp");
     if (filters.length == 0)
         return [];
 
     // Exclude one if requested.
     if (filterClass != undefined && filterClass.length > 0)
         filters = $(filters).not("[name$='" + filterClass + "']");
 
     for(var ix =0;subCbsFiltered.length > 0 && ix < filters.length;ix++) {
         subCbsFiltered = filterCompApplyOneFilter(filters[ix],subCbsFiltered);  // successively reduces
     }
 
     // Filter for Matrix CBs too
     if (subCbsFiltered.length > 0) {
         var matCbAll = $("input.matCB");
         var matCb = $(matCbAll).filter(":checked");
         if (matCbAll.length > matCb.length) {
             if (matCb.length == 0)
                 subCbsFiltered = [];
             else {
                 var subCbsAccumulating = [];
                 for(var ix =0;ix<matCb.length;ix++) {
                     var subCBOneFIlter = filterCompApplyOneMatCB(matCb[ix],subCbsFiltered);
                     if (subCBOneFIlter.length > 0)
                         filteredCBs = jQuery.merge( subCbsAccumulating, subCBOneFIlter );
                 }
                 subCbsFiltered = subCbsAccumulating;
             }
         }
     }
     //warnSince('filterCompSubCBsSurviving() matrix: '+subCbsFiltered.length);
     return subCbsFiltered;
 }
 
 function _filterComposite()
 { // Called when filterComp selection changes.  Will check/uncheck subtracks
     var subCbsSelected = filterCompSubCBsSurviving();
 
     // Uncheck:
     var subCbsToUnselect = $("input.subCB:checked");// Default all
     if (subCbsToUnselect.length > 0)
         $(subCbsToUnselect).each( function (i) { matSubCBcheckOne(this,false); });
     //warnSince('done with uncheck');
 
     // check:
     if (subCbsSelected.length > 0)
         $(subCbsSelected).each( function (i) { matSubCBcheckOne(this,true); });
     //warnSince('done with check');
 
     // Update count
     matSubCBsSelected();
     //warnSince('done');
 
     var tbody = $( subCbsSelected[0] ).parents('tbody.sorting');
     if (tbody != undefined)
          $(tbody).removeClass('sorting');
 }
 
 function filterCompositeTrigger()
 { // Called when filterComp selection changes.  Will check/uncheck subtracks
     var tbody = $( 'tbody.sortable');
     if (tbody != undefined)
          $(tbody).addClass('sorting');
 
     waitOnFunction(_filterComposite);
 }
 
 function filterCompositeDone(event)
 { // Called by custom 'done' event
     event.stopImmediatePropagation();
     $(this).unbind( event );
     filterCompositeTrigger();
     //waitOnFunction(filterCompositeTrigger,$(this));
 }
 
 function filterCompositeSelectionChanged(obj)
 { // filterComposite:onchange Set subtrack selection based upon the changed filter  [Not called for filterBy]
 
     var subCBs = $("input.subCB");
     if ( subCBs.length > 300) {
         //if ($.browser.msie) { // IE takes tooo long, so this should be called only when leaving the filterBy box
             $(obj).one('done',filterCompositeDone);
             return;
         //}
     } else
         filterCompositeTrigger();
 }
 
 function filterCompositeExcludeOptions(multiSelect)
 { // Will mark all options in one filterComposite boxes that are inconsistent with the current
   // selections in other filterComposite boxes.  Mark is class ".excluded"
     // Compare to the list of all trs
     var allSubCBs = $("input.subCB");
     if (allSubCBs.length == 0)
         return false;
 
     if ($.browser.msie && $(allSubCBs).filter(":checked").length > 300) // IE takes tooo long, so this should be called only when leaving the filterBy box
         return false;
 
     var filterClass = filterCompFilterVar(multiSelect);
     if (filterClass == undefined)
         return false;
 
     // Look at list of CBs that would be selected if all were selected for this filter
     var subCbsSelected = filterCompSubCBsSurviving(filterClass);
     if (subCbsSelected.length == 0)
         return false;
 
     if (allSubCBs.length == subCbsSelected.length) {
         $(multiSelect).children('option.excluded').removeClass('excluded');   // remove .excluded" from all
         return true;
     }
 
     //warnSince('filterCompositeExcludeOptions('+filterClass+'): subCbsSelected: '+subCbsSelected.length);
     // Walk through all selected subCBs to get other related tags
     var possibleSelections = [];  // empty array
     $( subCbsSelected ).each( function (i)  {
 
         var possibleClasses = $( this ).attr("class").split(" ");
         if( $(possibleClasses).length > 0)
             possibleClasses = aryRemoveVals(possibleClasses,[ "subCB" ]);
         if( $(possibleClasses).length > 0)
             possibleSelections = possibleSelections.concat(possibleClasses);
     });
     //warnSince('filterCompositeExcludeOptions('+filterClass+'): possibleSelections: '+possibleSelections.length);
 
     // Walk through all options in this filterBox to set excluded class
     var updated = false;
     if(possibleSelections.length > 0) {
         var opts = $(multiSelect).children("option");
         for(var ix = 1;ix < $(opts).length;ix++) { // All is always allowed
             if(aryFind(possibleSelections,opts[ix].value) == -1) {
                 if($(opts[ix]).hasClass('excluded') == false) {
                     $(opts[ix]).addClass('excluded');
                     updated = true;
                 }
             } else if($(opts[ix]).hasClass('excluded')) {
                 $(opts[ix]).removeClass('excluded');
                 updated = true;
             }
         }
     }
     return updated;
 }
 
 function filterCompositeClasses(wantSelected)
 {// returns an array of classes from the dim ABC filterComp classes: converts "matCB abc rep1"[]s to "rep1","rep2"
     var classes = new Array;
     var abcFBs = $("select.filterComp");
     if(abcFBs.length > 0) {
         $(abcFBs).each( function(i) {
             // Need to walk through list of options
             var ix=0;
             var allAreSelected = false;
             if (this.options[ix].value == "All") {
                 allAreSelected = this.options[ix].selected;
                 ix++;
             }
             for(;ix<this.length;ix++) {
                 if (allAreSelected || this.options[ix].selected) {
                     if (wantSelected)
                         classes.push(this.options[ix].value);
                 } else {
                     if (!wantSelected)
                         classes.push(this.options[ix].value);
                 }
             }
         });
     }
     return classes;
 }
 
 function multiSelectFocus(obj,sizeWhenOpen)
 { // Opens multiselect whenever it gets focus
     if($(obj).attr('size') != sizeWhenOpen) {
     $(obj).children("option").show();
     $(obj).attr('size',sizeWhenOpen);
     //warn("Selected:"+$(obj).children("option").filter(":selected").length);
     }
     //return false;
 }
 
 function multiSelectClick(obj,sizeWhenOpen)
 { // Opens multiselect whenever it is clicked
     if($(obj).attr('size') != sizeWhenOpen) {
         multiSelectFocus(obj,sizeWhenOpen);
         //$(obj).children("option").show();
         //$(obj).attr('size',sizeWhenOpen);
         return false;
     } else if($(obj).attr('selectedIndex') == 0)
         $(obj).attr('size',1);
 return true;
 }
 
 function navigationLinksSetup()
 { // Navigation links let you jump to places in the document
   // If they exist, then they need to be well placed to fit window dimensions
 
     // Put navigation links in top corner
     var navDown = $("#navDown");
     if(navDown != undefined && navDown.length > 0) {
         navDown = navDown[0];
         var winWidth = ($(window).width() - 20) + "px"; // Room for borders
         $('.windowSize').css({maxWidth:winWidth,width:winWidth});
         var sectTtl = $("#sectTtl");
         if(sectTtl != undefined && sectTtl.length > 0) {
             $(sectTtl).css({clear: 'none'});
             $(sectTtl).prepend($(navDown));
         }
         $(navDown).css({'float':'right', 'font-weight':'normal','font-size':'medium'});
         $(navDown).show();
     }
 
     // Decide if top links are needed
     var navUp = $('span.navUp');
     if(navUp != undefined && navUp.length > 0) {
         $(navUp).each(function(i) {
             var offset = $(this).parent().offset();
             if(offset.top  > ($(window).height()*(2/3))) {
                 $(this).show();
             }
         });
     }
 }
 
 function tableSortAtButtonPress(anchor,tagId)
 { // Special ONLY for hgTrackUi sorting.  Others use utils.js::tableSortOnButtonPress()
     var table = $( anchor ).parents("table.sortable");
     if (table) {
         subtrackCfgHideAll(table);
         waitOnFunction( _tableSortOnButtonPressEncapsulated, anchor, tagId);
     }
     return false;  // called by link so return false means don't try to go anywhere
 }
 
 var scm = { // subtrack config module.
     // This module is for subtrack level config embedded dialogs in hgTrackUi.
     // Subtrack config dialogs are embedded in the subtrack table and get populated when first
     // opened.  Composite and view level controls (parents) when updated override related
     // subtrack controls (children).  Subtrack controls, when updated overide parent controls
     // for the one subtrack.  Controls have no 'name' attribute until the user alters their value.
     // Unnamed controls are not sent to the cart.
 
     // Definitions as used here:
     // obj: an input or select style html control which may be named or unnamed
     //   parentObj: composite or view level obj which has subtrack level childObjs associated
     //   childObj: subtrack level obj that has composite and or view level parentObjs
     // cfg: subtrack level embedded dialog which can be opened or closed (hidden) and isn't
     //      populated till first opened.  Can also be a viewCfg and maybe a compositeCfg
     // populate: act of filling a subtrack cfg with controls
     // named: control with a name attribute which means it has been updated by the user.
     //        Unfortunately radio buttons are an exception, since they must keep their names.
     // unnamed: control that has not been updated by the user.  Will not be sent to cart.
 
     // TODO:
     // 1) outside in: matrix and subtrack checkboxes to affect vis
     // 2) Non-configurable will need to show/change vis independently! (separate vis control instead of wrench?)
     // 3) SOLVED: Radio buttons work BUT they require name to keep unified set, so rely upon 'changed' class to detect changes.
     // 4) SOLVED: checkboxes: working with name = boolshad.{name}   FIXME: multishad?
     // 5) SOLVED: filterBy,filterComp working: they rely upon id, and id with '.' screwed it all up.  So replaced '.' with '_-'
     // 6) SOLVED: subCfg not matching parent: solved.
     // 7) SOLVED: OpenChromSynth: subtrack filterby needs to be updated by composite filterBy.
     // 8) Remove debug code when ready
     // - check subtrack to enable/disable fauxVis and wrench
     // - matCB should effect subCb including enable/disable fauxVis and wrench
     // - composite/view vis should effect subVis and enable/disable fauxVis and wrench
     // NOTE:
     // Current implementation relies upon '.' delimiter in name and no '_-' in name.  Nothing breaks rule yet...
 
     //mySelf: null, // There is no need for a "mySelf" unless this object is being instantiated.
 
     // There is one instance and these vars are page wide
     compositeId: null,
     visIndependent: false,
     viewIds: [],
 
     markChange: function (obj)
     { // Marks a control as having been changed by the user.  Naming will send value to cart.
         $(obj).addClass('changed');
         if(obj.type.indexOf("radio") != 0) {   // radios must keep their names!
             var oldName = obj.id.replace(/\_\-/g,'.');   // sanitized id replaces '.' with '_-'
             $(obj).attr('name',oldName);
         }
     },
 
     clearChange: function (obj)
     { // Mark as unchanged
         $(obj).removeClass('changed');
         if(obj.type.indexOf("radio") != 0)   // radios must keep their names!
             $(obj).removeAttr('name');
     },
 
     markCheckboxChange: function (obj)
     { // Marks a checkbox as having changed and the boolshad too if there is one
         scm.markChange(obj);
 
         //var safeId = obj.id.replace(/\./g,"\\.");
         //var boolshad = $('input#boolshad\\.' + safeId);
         var boolshad = $('input#boolshad_-' + obj.id);
         if (boolshad != undefined && boolshad.length > 0) {
             if (boolshad.length == 1)
                 boolshad = boolshad[0];
             if(obj.checked == false)
                 scm.markChange(boolshad);
             else
                 scm.clearChange(boolshad);
         }
     },
 
     hasChanged: function (obj)
     { // Is this object updated (value changed by a user)?
         return $(obj).hasClass('changed');
     },
 
     unnameIt: function (obj,setId)
     { // removes a control's name so that it will not be updated to the cart upon submit
       // If setId and obj has a name, will set id to current name
         if (setId) {
             var myName = $(obj).attr('name');
             if (myName && myName.length > 0) {
                 // DEBUG -------------
                 if (myName.indexOf('_-') >= 0)
                     warn("Found control with '_-' in name: "+myName + "<BR>This violates the naming rules and will break javascript code.");
                 // DEBUG -------------
                 myName = myName.replace(/\./g,'_-');   // sanitized id replaces '.' with '_-'
                 $(obj).attr('id',myName);
             }
         }
         scm.clearChange(obj);
     },
 
     compositeCfgFind: function ()
     { // returns the cfg container for the composite controls
         // TODO: write, create a composite cfg div!
     },
 
     compositeObjFind: function (suffix)
     { // returns the composite level control for this suffix
         //var compCfg = scm.compositeCfgFind();
         var compObj = undefined;
         if (suffix != undefined) {
             //compObj = $('#'+ scm.compositeId + '\\.' + suffix);
             compObj = $('#'+ scm.compositeId + '_-' + suffix);
             if (compObj == undefined || compObj.length == 0) {
                 compObj = $('#'+ scm.compositeId + '_' + suffix);
             }
         } else {
             compObj = $("#"+scm.compositeId);
         }
         if (compObj == undefined || compObj.length == 0) {
             //warn('Could not find viewObj for '+suffix);
             return undefined;
         }
         if (compObj.length == 1)
             compObj = compObj[0];
         return compObj;
     },
 
     viewIdFind: function (childObj)
     { // returns the name of the view that is a parent of this subtrack control
         var cfg = $(childObj).parents('div.subCfg');
         if (cfg == undefined || cfg.length == 0) {
             warn("Can't find containing div.subCfg of child '"+$(childObj).attr('id')+"'.");
             return undefined;
         }
         var classList = $( cfg[0] ).attr("class").split(" ");
         classList = aryRemove(classList,"subCfg","filled");
         if (classList.length == 0) {
             warn("Subtrack cfg div does not have view class for child '"+$(childObj).attr('id')+"'.");
             return undefined;
         } else if (classList.length > 1) {
             warn("Subtrack cfg div for '"+$(childObj).attr('id')+"' has unexpected class: "+classList);
             return undefined;
         }
         if (classList[0] == 'noView') // valid case
             return undefined;
         return classList[0];
     },
 
     viewCfgFind: function (viewId)
     { // returns the cfg container for a given view
         var viewCfg = $('tr#tr_cfg_'+viewId);
         if (viewCfg == undefined || viewCfg.length == 0) {
             warn('Could not find viewCfg for '+viewId);
         }
         if (viewCfg.length == 1)
             viewCfg = viewCfg[0];
         return viewCfg;
     },
 
     viewObjFind: function (viewId,suffix)
     { // returns the control belonging to this view and suffix
         var viewObj = undefined;
         if (suffix != undefined) {
             var viewCfg = scm.viewCfgFind(viewId);
             //viewObj = $(viewCfg).find("[id$='\\."+suffix+"']");
             viewObj = $(viewCfg).find("[id$='_-"+suffix+"']");
             if (viewObj == undefined || viewObj.length == 0) {
                 viewObj = $(viewCfg).find("[id$='_"+suffix+"']");
             }
         } else {
             //viewObj = $("#"+scm.compositeId+"\\."+viewId+"\\.vis");
             viewObj = $("#"+scm.compositeId+"_-"+viewId+"_-vis");
         }
         if (viewObj == undefined || viewObj.length == 0) {
             // Okay not to find a view for this composite level obj
             //warn('Could not find viewObj for '+viewId+'.'+suffix);
             return undefined;
         }
         if (viewObj.length == 1)
             viewObj = viewObj[0];
         return viewObj;
     },
 
     childObjsFind: function (viewId,suffix)
     { // returns an array of objs for this view and suffix
       // Assumes composite wide if viewId is not provided
       // Assumes vis if suffix is not provided
 
         if (viewId != undefined) {
             var childCfgs = $('div.subCfg.filled.'+viewId);
         } else {
             var childCfgs = $('div.subCfg.filled');
         }
         if (childCfgs == undefined || childCfgs.length == 0)
             return [];
 
         var childObjs = [];
         if (suffix != undefined)
             childObjs = $(childCfgs).find('select,input').filter("[id$='_-"+suffix+"']");
         else
             childObjs = $(childCfgs).find('select.visDD');
 
         if (childObjs == undefined)
             return [];
 
         return childObjs;
     },
 
     objSuffixGet: function (obj)
     { // returns the identifying suffix of a control.  obj can be parent or child
         //var nameParts = $(obj).attr('id').split('.');
         var nameParts = $(obj).attr('id').split('_-');
         if (nameParts == undefined || nameParts.length == 0) {
             warn("Can't resolve id for '"+$(obj).attr('id')+"'.");
             return undefined;
         }
         if (nameParts.length < 2)
             return undefined;
 
         nameParts.shift();
         if (scm.viewIds.length > 0 && nameParts.length > 1) // FIXME: I expect more problems with this!
             nameParts.shift();
 
         return nameParts.join('_-');
     },
 
     childCfgFind: function (childObj)
     { // returns the cfg wrapper for a child vis object
         var childCfg = $(childObj).parents('div.subCfg.filled');
         if (childCfg == undefined || childCfg.length == 0) {
             warn("Can't find childCfg for "+childObj.id);
             return false;
         }
         if (childCfg.length == 1)
             childCfg = childCfg[0];
         return childCfg;
     },
 
     subCbFind: function (childObj)
     { // returns the subCB for a child vis object
         var childCfg = scm.childCfgFind(childObj);
         if (childCfg == undefined)
             return undefined;
 
         var tr = $(childCfg).parents('tr').first();
         var subtrack = childCfg.id.substring(8); // 'div_cfg_'.length
         var subCb = $(tr).find("input[name='"+subtrack+"_sel']");
         if (subCb == undefined || subCb.length == 0) {
             warn("Can't find subCB for subtrack: "+subtrack);
             return undefined;
         }
         if (subCb.length == 1)
             subCb = subCb[0];
         return subCb;
     },
 
     visChanged: function (childObj)
     { // called on change for a child vis control
         var subCb = scm.subCbFind(childObj);
         if (subCb != undefined) {
             if (childObj.selectedIndex > 0)
                 subCb.checked = true;
                 matSubCbClick(subCb);
         }
         $(childObj).attr('name',childObj.id);
     },
 
     parentsFind: function (childObj)
     { // returns array of composite and/or view level parent controls
         var myParents = [];
         var suffix = scm.objSuffixGet(childObj);
         var notRadio = (childObj.type.indexOf("radio") != 0);
 
         // find view name
         var viewId = scm.viewIdFind(childObj);
         if (viewId != undefined) {
             var viewObj = scm.viewObjFind(viewId,suffix);
             if (viewObj != undefined) {
                 if (notRadio)
                     myParents[0] = viewObj;
                 else {
                     $(viewObj).each(function (i) { // radios will have more than one
                         if(childObj.value == this.value) {
                             myParents[0] = this;
                             return false; // breaks each, but not parentsFind
                         }
                     });
                 }
             }
         }
 
         var compObj = scm.compositeObjFind(suffix);
         if (compObj != undefined) {
             if (notRadio)
                 myParents[myParents.length] = compObj;
             else {
                 $(compObj).each(function (i) { // radios will have more than one
                     if(childObj.value == this.value) {
                         myParents[myParents.length] = this;
                         return false;
                     }
                 });
             }
         }
         return myParents;
     },
 
     childrenFind: function (parentObj)
     { // returns array of all currently populated child controls related to this parent control
       // parentObj could be composite level or view level
       // parent object could be for vis which has special rules
 
         var isComposite = false;
         var isVis = false;
         var suffix = scm.objSuffixGet(parentObj);
-        isVis = (suffix != undefined && suffix == 'vis');
+        isVis = (suffix != undefined && suffix == 'vis');  // vis inside of subCfg
 
         var viewId = undefined;
         if (isVis) { // This is a view control
 
             isComposite = (suffix == undefined);
             suffix = undefined;
             if (!isComposite) {
                 var classList = $( parentObj ).attr("class").split(" ");
                 classList = aryRemove(classList,"viewDD","normalText");
                 if (classList.length != 1) {
                     warn("Unexpected view vis class list:"+classList);
                     return [];
                 }
                 viewId = classList[0];
             }
         } else { // normal obj
 
             var viewCfg = $(parentObj).parents("tr[id^='tr_cfg_']");
             isComposite = (viewCfg == undefined || viewCfg.length == 0); // is composite
             if (!isComposite) {
                 if (viewCfg.length == 1)
                     viewCfg = viewCfg[0];
                 viewId = viewCfg.id.substring(7); // 'tr_cfg_'.length
             }
         }
 
         if (isComposite) {
 
             // There may be views
             if (scm.viewIds.length > 0) {
                 var allChildren = [];
                 for (var ix = 0;ix < scm.viewIds.length;ix++) {
                     viewId = scm.viewIds[ix];
                     // Get any view objs first
                     var viewObj = scm.viewObjFind(viewId,suffix);
                     if (viewObj != undefined)
                         allChildren[allChildren.length] = viewObj;
                     // Now get children
                     var viewChildren = scm.childObjsFind(viewId,suffix);
                     if (viewChildren.length > 0) {
                         if (allChildren.length == 0)
                             allChildren = viewChildren;
                         else
                             allChildren = jQuery.merge( allChildren, viewChildren );
                     }
                 }
                 return allChildren;
             } else { // if no views then just get them all
                 return scm.childObjsFind(undefined,suffix);
             }
 
         } else {
             return scm.childObjsFind(viewId,suffix);
         }
     },
 
+    visChildrenFind: function (parentObj)
+    { // returns array of all currently faux and populated vis child controls (which are not in subCfg div)
+      // parentObj could be composite level or view level
+
+        var isVis = false;
+        var suffix = scm.objSuffixGet(parentObj);
+        isVis = (suffix == undefined || suffix == 'vis');
+        var isComposite = (suffix == undefined);
+
+        var subVis = $('.subVisDD');  // select:vis or faux:div
+        if (isComposite) {
+
+            return subVis;
+
+        } else {
+            var classList = $( parentObj ).attr("class").split(" ");
+            classList = aryRemove(classList,"viewDD","normalText");
+            if (classList.length != 1) {
+                warn("Unexpected view vis class list:"+classList);
+                return [];
+            }
+            return $(subVis).filter('.' + classList[0]);
+        }
+    },
+
     propagateSetting: function (parentObj)
     { // propagate composite/view level setting to subtrack children
         var children = scm.childrenFind(parentObj);
         if(parentObj.type.indexOf("checkbox") == 0) {
             var parentChecked = parentObj.checked;
             $(children).each(function (i) {
                 // Note checkbox and boolshad are children.
                 if (this.type != 'hidden')
                     this.checked = parentObj.checked;
                 scm.clearChange(this);
             });
             // deal with hidden boolshads!
             //var parentIdSafe = parentObj.id.replace(/\./g,"\\.");
             //var boolshad = $('input#boolshad\\.'+parentIdSafe);
             var boolshad = $('input#boolshad_-'+parentObj.id);
             if (boolshad != undefined && boolshad.length > 0) {
                 if (boolshad.length == 1)
                     boolshad = boolshad[0];
                 if (parentObj.checked == false)
                     scm.markChange(boolshad);
                 else
                     scm.clearChange(boolshad);
             }
         } else if(parentObj.type.indexOf("radio") == 0) {
             var parentChecked = parentObj.checked;
             var parentVal = $(parentObj).val();
             $(children).each(function (i) {
                 if ($(this).val() == parentVal)
                     this.checked = parentObj.checked;
                 scm.clearChange(this);
             });
         } else {// selects and inputs are easy
             var parentVal = $(parentObj).val();
             var updateDdcl = ($(parentObj).hasClass('filterBy') || $(parentObj).hasClass('filterComp'));
             $(children).each(function (i) {
                 $(this).val(parentVal);
                 scm.clearChange(this);
                 if (updateDdcl)
                     ddcl.onComplete(this);
             });
         }
         scm.markChange(parentObj);
     },
 
     propagateViewVis: function (viewObj,compositeVis)
     { // propagate vis from a view limiting with compositeVis
         var limitedVis = Math.min (compositeVis,viewObj.selectedIndex);
-        var children = scm.childrenFind(viewObj);
+        var visText = 'hide';
+        if (limitedVis == 1)
+            visText = 'dense';
+        else if (limitedVis == 2)
+            visText = 'squish';
+        else if (limitedVis == 3)
+            visText = 'pack';
+        else if (limitedVis == 4)
+            visText = 'full';
+        // vis outside of subCfg
+        var children = scm.visChildrenFind(viewObj);
         $(children).each(function (i) {
-            // TODO: only set if selected?
+            if ($(this).hasClass('fauxInput')) {
+                $(this).text(visText);
+            } else {
             $(this).attr('selectedIndex',limitedVis);
             scm.clearChange(this);
+            }
         });
+        // vis inside of subCfg
+        //var children = scm.childrenFind(viewObj);
+        //$(children).each(function (i) {
+        //    // TODO: only set if selected?
+        //    $(this).attr('selectedIndex',limitedVis);
+        //    scm.clearChange(this);
+        //});
     },
+
     propagateVis: function (parentObj,viewId)
     { // propagate vis settings to subtrack children
         if (viewId == null) {
             // Walk through views and set with this
             var parentVis = parentObj.selectedIndex;
             if (scm.viewIds.length > 0) {
-                for (ix=0;ix<scm.viewIds;ix++) {
-                    var viewObj = scm.viewObjFind(viewIds[ix],undefined);
+                for (var ix=0;ix<scm.viewIds.length;ix++) {
+                    var viewObj = scm.viewObjFind(scm.viewIds[ix]);//,undefined);
                     if (viewObj != undefined)
                         scm.propagateViewVis(viewObj,parentVis);
                 }
             } else { // No view so, simple
-                var children = scm.childrenFind(parentObj);
+                // vis outside of subCfg
+                var visText = 'hide';
+                if (parentVis == 1)
+                    visText = 'dense';
+                else if (parentVis == 2)
+                    visText = 'squish';
+                else if (parentVis == 3)
+                    visText = 'pack';
+                else if (parentVis == 4)
+                    visText = 'full';
+                var children = scm.visChildrenFind(parentObj);
                 $(children).each(function (i) {
-                    var subCb = scm.subCbFind(this);
-                    if (subCb != undefined) {
-                        if (subCb.disabled != true && subCb.checked) {  // TODO: Integrate with things that enable/check!
+                    if ($(this).hasClass('fauxInput')) {
+                        $(this).text(visText);
+                    } else {
                             $(this).attr('selectedIndex',parentVis);
                             scm.clearChange(this);
                         }
-                    }
                 });
+                // vis inside of subCfg
+                //var children = scm.childrenFind(parentObj);
+                //$(children).each(function (i) {
+                //    var subCb = scm.subCbFind(this);
+                //    if (subCb != undefined) {
+                //        if (subCb.disabled != true && subCb.checked) {  // TODO: Integrate with things that enable/check!
+                //            $(this).attr('selectedIndex',parentVis);
+                //            scm.clearChange(this);
+                //        }
+                //    }
+                //});
             }
         } else {
             // First get composite vis to limit with
             var compObj = scm.compositeObjFind(undefined);
             if (compObj == undefined) {
                 warn('Could not find composite vis object!');
                 return false;
             }
             scm.propagateViewVis(parentObj,compObj.selectedIndex);
         }
     },
 
     inheritSetting: function (childObj)
     { // update value if parents values override child values.
         var myParents = scm.parentsFind(childObj);
         if (myParents == undefined || myParents.length < 1) {
             // DEBUG -------------  It is probably okay to subCfg without parent cfg, but we need to be sure
             warn('No parents were found for childObj: '+childObj.id);
             // DEBUG -------------
             return true;
         }
         var isVis = (undefined == scm.objSuffixGet(childObj));
         if (isVis) {
             var subCb = scm.subCbFind(childObj);
             if (subCb != undefined) {
                 if (subCb.disabled == true || subCb.checked == false)   // TODO: Integrate with _sel subCbs and matCbs
                     $(childObj).attr('selectedIndex',0);
                 else {
                     var limitedVis = 9;
                     if (myParents.length == 1 && scm.hasChanged(myParents[0]))
                         limitedVis = myParents[0].selectedIndex;
                     else if (myParents.length == 2) {
                         if (scm.hasChanged(myParents[0]) || scm.hasChanged(myParents[1]))
                             limitedVis = Math.min(myParents[0].selectedIndex,myParents[1].selectedIndex);
                     }
                     if (limitedVis < 9)
                         $(childObj).attr('selectedIndex',limitedVis);
                 }
             }
         } else {
             var count = 0;
             if(childObj.type.indexOf("checkbox") == 0) {
                 $(myParents).each(function (i) {
                     if (scm.hasChanged(this)) {
                         childObj.checked = this.checked;
                         // can ignore boolshad because this does not change
                         count++;
                     }
                 });
             } else if(childObj.type.indexOf("radio") == 0) {
                 $(myParents).each(function (i) {
                     if (scm.hasChanged(this)) {
                         childObj.checked = this.checked;
                         // parentObj is already "tuned" to the correct radio, so this works
                         count++;
                     }
                 });
             } else {// selects and inputs are easy
                 $(myParents).each(function (i) {
                     if (scm.hasChanged(this)) {
                         $(childObj).val($(this).val());
                         count++;
                     }
                 });
             }
             if (count > 1) // if hasChanged() is working, there should never be more than one
                 warn('Both composite and view are seen as updated!  Named update is not working.');
         }
     },
 
     currentCfg: null, // keep track of cfg while ajaxing, man
     currentSub: null, // keep track of subtrack while ajaxing, dude
 
     cfgFill: function (content, status)
     { // Finishes the population of a subtrack cfg.  Called by ajax return.
         var cfg = scm.currentCfg;
         scm.currentCfg = null;
         var cleanHtml = content;
         var shlurpPattern=/\<script type=\'text\/javascript\' SRC\=\'.*\'\>\<\/script\>/gi;
         // DEBUG -------------
             var jsFiles = cleanHtml.match(shlurpPattern);
             if (jsFiles && jsFiles.length > 0)
                 alert("jsFiles:'"+jsFiles+"'\n---------------\n"+cleanHtml); // warn() interprets html, etc.
         // DEBUG -------------
         cleanHtml = cleanHtml.replace(shlurpPattern,"");
         shlurpPattern=/\<script type=\'text\/javascript\'>.*\<\/script\>/gi;
         // DEBUG -------------
             var jsEmbeded = cleanHtml.match(shlurpPattern);
             if (jsEmbeded && jsEmbeded.length > 0)
                 alert("jsEmbeded:'"+jsEmbeded+"'\n---------------\n"+cleanHtml);
         // DEBUG -------------
         cleanHtml = cleanHtml.replace(shlurpPattern,"");
         shlurpPattern=/\<LINK rel=\'STYLESHEET\' href\=\'.*\' TYPE=\'text\/css\' \/\>/gi;
         // DEBUG -------------
             var cssFiles = cleanHtml.match(shlurpPattern);
             if (cssFiles && cssFiles.length > 0)
                 alert("cssFiles:'"+cssFiles+"'\n---------------\n"+cleanHtml);
         // DEBUG -------------
         cleanHtml = cleanHtml.replace(shlurpPattern,"");
         if (scm.visIndependent) {
             ix = cleanHtml.indexOf('</SELECT>');
             if (ix > 0)
                 cleanHtml = cleanHtml.substring(ix+'</SELECT>'.length);
             while(cleanHtml.length > 0) {
                 ix = cleanHtml.search("<");
                 cleanHtml = cleanHtml.substring(ix);
                 ix = cleanHtml.search(/\<BR\>/i);
                 if (ix != 0)
                     break; // Not found or not at start.
                 else
                     cleanHtml = cleanHtml.substring(4); // skip past <BR> and continue
             }
         } else {
             var ix = cleanHtml.indexOf('<B>Display&nbsp;mode:&nbsp;</B>');
             if (ix > 0)
                 cleanHtml = cleanHtml.substring(ix+'<B>Display&nbsp;mode:&nbsp;</B>'.length);
         }
             //cleanHtml = cleanHtml.substring(ix);
         ix = cleanHtml.indexOf('</FORM>'); // start of form already chipped off
         if (ix > 0)
             cleanHtml = cleanHtml.substring(0,ix - 1);
 
         //cleanHtml = "<div class='blueBox' style='background-color:#FFF9D2; padding:0.2em 1em 1em; float:left;'><CENTER><B>Subtrack Configuration</B></CENTER><BR>" + cleanHtml + "</div>"
         //cleanHtml = "<div class='blueBox' style='background-color:#FFF9D2; padding:0.2em 1em 1em; float:left;'><B>Subtrack visibility:</B>&nbsp;" + cleanHtml + "</div>"
         cleanHtml = "<div class='blueBox' style='background-color:#FFF9D2; padding:0.5em 1em 1em;'>" + cleanHtml + "</div>"
         $(cfg).html(cleanHtml);
         $(cfg).addClass('filled');
         var boxWithin = $(cfg).find('.blueBox');
         if (boxWithin.length > 1)
             $(boxWithin[1]).removeClass('blueBox');
 
         //$(cfg).html("<div style='font-size:.9em;'>" + cleanHtml + "</div>");
         var subObjs = $(cfg).find('input,select').filter("[name]");
         if (subObjs.length == 0) {
             warn('Did not find controls for cfg: ' + cfg.id);
             return;
         }
         $(subObjs).each(function (i) {
             if (this.name != undefined) { // The filter("[name]") above didn't do it!
                 if (this.type != 'hidden') {
                     scm.unnameIt(this,true);
                     scm.inheritSetting(this); // updates any values that have been changed on this page
                     // if view vis do more than just name it on change
                     var suffix = scm.objSuffixGet(this);
                     if (suffix == undefined) // vis
                         $(this).bind('change',function (e) {
                             scm.visChanged(this);
                         });
                     else {
                         $(this).bind('change',function (e) {
                             if(this.type.indexOf("checkbox") == 0)
                                 scm.markCheckboxChange(this);
                             else
                                 scm.markChange(this);
                         });
                     }
                 } else {//if (this.type == 'hidden') {
                     // Special for checkboixes with name = boolshad.{name}.
                     if ("boolshad." == this.name.substring(0,9)) {
                         scm.unnameIt(this,true);
                     }
                 }
             }
         });
         // finally show
         $(cfg).show();
         // Tricks to get this in the size and position I want
         $(cfg).css({ position: 'absolute'});
         var myWidth = $(cfg).width();
         var shiftLeft = -1;
         if (scm.visIndependent) {
             shiftLeft *= ($(cfg).position().left - 125);
             var subVis = $('div#' + scm.currentSub+'_faux');
             if (subVis != undefined && subVis.length == 1) {
                 // SHOULD NOT NEED $(subVis[0]).removeClass('disabled');
                 scm.replaceWithVis(subVis[0],scm.currentSub,false);
             }
         }
         else
             shiftLeft *= ($(cfg).position().left - 40);
         $(cfg).css({ width: myWidth+'px',position: 'relative', left: shiftLeft + 'px' });
 
         // Setting up filterBys must follow show because sizing requires visibility
         if (newJQuery) {
             $(cfg).find('.filterBy,.filterComp').each( function(i) {
                 if ($(this).hasClass('filterComp'))
                     ddcl.setup(this);
                 else
                     ddcl.setup(this, 'noneIsAll');
             });
         }
     },
 
     cfgPopulate: function (cfg,subtrack)
     { // Populates a subtrack cfg dialog via ajax and update from composite/view parents
         scm.currentCfg = cfg;
         scm.currentSub = subtrack;
 
         $.ajax({
             type: "GET",
             url: "../cgi-bin/hgTrackUi?ajax=1&g=" + subtrack + "&hgsid=" + getHgsid() + "&db=" + getDb(),
             dataType: "html",
             trueSuccess: scm.cfgFill,
             success: catchErrorOrDispatch,
             error: errorHandler,
             cmd: "cfg",
             cache: false
         });
     },
 
     replaceWithVis: function (obj,subtrack,open)
     { // Replaces the current fauxVis object with a true visibility selector
 
         if ($(obj).hasClass('disabled'))
             return;
-        var selectHtml = "<SELECT id='"+subtrack+"' class='normalText subVisDD' style='width: 70px'>";
+        var classList = $( obj ).attr("class").split(" ");
+        var view = classList[classList.length - 1];
+        var classList = $(obj).attr('class').split(' '); // This relies on view being the last class!!!
+        var selectHtml = "<SELECT id='"+subtrack+"' class='normalText subVisDD "+view+"' style='width: 70px'>";
         var selected = $(obj).text();
         if (selected == 'hide')
             selectHtml += "<OPTION SELECTED>hide</OPTION><OPTION>dense</OPTION><OPTION>squish</OPTION><OPTION>pack</OPTION><OPTION>full</OPTION>";
         else if (selected == 'dense')
             selectHtml += "<OPTION>hide</OPTION><OPTION SELECTED>dense</OPTION><OPTION>squish</OPTION><OPTION>pack</OPTION><OPTION>full</OPTION>";
         else if (selected == 'squish')
             selectHtml += "<OPTION>hide</OPTION><OPTION>dense</OPTION><OPTION SELECTED>squish</OPTION><OPTION>pack</OPTION><OPTION>full</OPTION>";
         else if (selected == 'full')
             selectHtml += "<OPTION>hide</OPTION><OPTION>dense</OPTION><OPTION>squish</OPTION><OPTION>pack</OPTION><OPTION SELECTED>full</OPTION>";
         else
             selectHtml += "<OPTION>hide</OPTION><OPTION>dense</OPTION><OPTION>squish</OPTION><OPTION>pack</OPTION><OPTION>full</OPTION>";
         selectHtml += "</SELECT>";
         $(obj).replaceWith(selectHtml);
         if (open) {
             var newObj = $('select#'+subtrack);
             $(newObj).attr('size',5)
             $(newObj).one('blur',function (e) {
                 $(this).attr('size',1);
                 $(this).unbind()
             });
             $(newObj).one('change',function (e) {
                 $(this).attr('size',1);
             });
             // Doesn't work!
             //$(newObj).parents('td').first().attr('valign','top');
             $(newObj).focus();
         }
     },
 
-    enableCfg: function (cb,subtrack,setTo)
+    enableCfg: function (subCb,subtrack,setTo)
     { // Enables or disables subVis and wrench
-        if (cb == null || cb == undefined) {
+        if (subCb == null || subCb == undefined) {
             if (subtrack == null || subtrack.length == 0) {
                 warn("scm.enableCfg() called without CB or subtrack.");
                 return false;
             }
-            cb = $("input[name='"+subtrack+"'_sel]");
-            if (cb == undefined || cb.length == 0) {
+            subCb = $("input[name='"+subtrack+"'_sel]");
+            if (subCb == undefined || subCb.length == 0) {
                 warn("scm.enableCfg() could not find CB for subtrack: "+subtrack);
                 return false;
             }
         }
-        if (cb.length == 1)
-            cb = cb[0];
+        if (subCb.length == 1)
+            subCb = subCb[0];
 
-        var td = $(cb).parent('td');
+        var td = $(subCb).parent('td');
         if (td == undefined || td.length == 0) {
-            warn("scm.enableCfg() could not TD for CB: "+cb.name);
+            warn("scm.enableCfg() could not find TD for CB: "+subCb.name);
             return false;
         }
         if (td.length == 1)
             td = td[0];
         var subFaux = $(td).find('div.subVisDD');
         if (subFaux != undefined && subFaux.length > 0) {
             if (setTo == true)
                 $(subFaux).removeClass('disabled');
             else
                 $(subFaux).addClass('disabled');
         } else {
             var subVis = $(td).find('select.subVisDD');
             if (subVis != undefined && subVis.length > 0) {
                 $(subVis).attr('disable',!setTo);
             }
         }
         var wrench = $(td).find('span.clickable'); // TODO tighten this
         if (wrench != undefined && wrench.length > 0) {
             if (setTo == true)
                 $(wrench).removeClass('halfVis');
             else
                 $(wrench).addClass('halfVis');
         }
     },
+
     cfgToggle: function (wrench,subtrack)
     { // Opens/closes subtrack cfg dialog, populating if empty
         var cfg = $("div#div_cfg_"+subtrack);
         if (cfg == undefined || cfg.length == 0) {
             warn("Can't find div_cfg_"+subtrack);
             return false;
         }
         if (cfg.length == 1)
             cfg = cfg[0];
 
         if ($(cfg).css('display') == 'none') {
             if ($(wrench).hasClass('halfVis'))
                 return;
             // Don't allow if this composite is not enabled!
             // find the cb
             var tr = $(cfg).parents('tr').first();
             var subCb = $(tr).find("input[name='"+subtrack+"_sel']");
             if (subCb == undefined || subCb.length == 0) {
                 warn("Can't find subCB for "+subtrack);
                 return false;
             }
             if (subCb.length == 1)
                 subCb = subCb[0];
             if (subCb.disabled == true) // || subCb.checked == false)
                 return false;
 
             if(metadataIsVisible(subtrack))
                 metadataShowHide(subtrack,"","");
             if ($(cfg).hasClass('filled'))
                 $(cfg).show();
             else
                 waitOnFunction( scm.cfgPopulate, cfg, subtrack );
         } else
             $(cfg).hide();
         return false; // called by link!
     },
 
     viewInit: function (viewId)
     { // unnames all view controls
         // iterate through all matching controls and unname
         var tr = $('tr#tr_cfg_'+viewId);
         if (tr == undefined || tr.length == 0) {
             warn('Did not find view: ' + viewId);
             return;
         }
         if (tr.length == 1)
             tr = tr[0];
         var viewAllObjs = $(tr).find('input,select')
         var viewObjs = $(viewAllObjs).not("input[type='hidden']");
         if (viewObjs.length > 0) {
             $(viewObjs).each(function (i) {
                 scm.unnameIt(this,true);
                 $(this).bind('change',function (e) {
                     scm.propagateSetting(this);
                 });
             });
         }
         // Special for checkboxes: boolshad
         var boolObjs = $(viewAllObjs).filter("input[type='hidden']").filter("[name^='boolshad\\.']");
         $(boolObjs).each(function (i) {
             scm.unnameIt(this,true);
         });
 
         // Now vis control
         var visObj = $("select[name='"+scm.compositeId+"\\."+viewId+"\\.vis']");
         if (visObj == undefined || visObj.length == 0) {
             warn('Did not find visibility control for view: ' + viewId);
             return;
         }
         if (visObj.length == 1)
             visObj = visObj[0];
         scm.unnameIt(visObj,true);
         $(visObj).bind('change',function (e) {
             scm.propagateVis(visObj,viewId);
         });
     },
 
     initialize: function ()
     { // unnames all composite controls and then all view controls
         // mySelf = this; // There is no need for a "mySelf" unless this object is being instantiated.
         scm.compositeId = $('.visDD').first().attr('name');
         scm.visIndependent = ($('.subVisDD').length > 0);
 
         // Find all appropriate controls and unname
 
         // matCBs are easy, they never get named again
         var matCbs = $('input.matCB');
         $(matCbs).each(function (i) {
             scm.unnameIt(this,false);
         });
 
         // Now vis control
         var visObj = $("select[name='"+scm.compositeId+"']");
         if (visObj == undefined || visObj.length == 0) {
             warn('Did not find visibility control for composite.');
             return;
         }
         if (visObj.length == 1)
             visObj = visObj[0];
         scm.unnameIt(visObj,true);
         $(visObj).bind('change',function (e) {
             scm.propagateVis(visObj,null);
         });
 
         // iterate through views
         var viewVis = $('select.viewDD');
         $(viewVis).each(function (i) {
             var classList = $( this ).attr("class").split(" ");
             classList = aryRemove(classList,"viewDD","normalText");
             if (classList.length == 0)
                 warn('View classlist is missing view class.');
             else if (classList.length > 1)
                 warn('View classlist contains unexpected classes:' + classList);
             else {
                 scm.viewIds[scm.viewIds.length] = classList[0];
                 scm.viewInit(classList[0]);
             }
         });
 
         // Tricky for composite level controls.  Could wrap cfg controls in new div.
         // DO THIS AFTER Views
         // NOTE: excluding sortOrder and showCfg which are special cases we don't care about in scm
         var compObjs = $('select,input').filter("[name^='"+scm.compositeId+"\\.'],[name^='"+scm.compositeId+"_']");
         if (compObjs != undefined && compObjs.length > 0) {
             compObjs = $(compObjs).not("[name$='showCfg']");
             $(compObjs).each(function (i) {
                 // DEBUG -------------
                 if (this.id != undefined
                 && this.id.length > 0
                 && $(this).hasClass('filterBy') == false
                 && $(this).hasClass('filterComp') == false)
                     warn('['+this.name + ']  #'+this.id);
                 // DEBUG -------------
                 scm.unnameIt(this,true);
                 $(this).bind('change',function (e) {
                     scm.propagateSetting(this);
                 });
             });
         }
         // Special for checkboxes: boolshad
         var boolObjs = $("input[type='hidden']");
         var boolObjs = $(boolObjs).filter("[name^='boolshad\\."+scm.compositeId+"\\.'],[name^='boolshad\\."+scm.compositeId+"_']");
         $(boolObjs).each(function (i) {
             scm.unnameIt(this,true);
         });
 
     }
 };
 
 // The following js depends upon the jQuery library
 $(document).ready(function()
 {
     // If divs with class 'subCfg' then initialize the subtrack cfg code
     // NOTE: must be before any ddcl setup
     var divs = $("div.subCfg");
     if (divs != undefined && divs.length > 0) {
         scm.initialize();
     }
 
     // Initialize sortable tables
     $('table.sortable').each(function (ix) {
         sortTableInitialize(this,true,true);
     });
 
     // Register tables with drag and drop
     $("table.tableWithDragAndDrop").each(function (ix) {
         tableDragAndDropRegister(this);
     });
 
     //$('.halfVis').css('opacity', '0.5'); // The 1/2 opacity just doesn't get set from cgi!
 
     $('.filterComp').each( function(i) { // Do this by 'each' to set noneIsAll individually
         if (newJQuery == false)
             $(this).dropdownchecklist({ firstItemChecksAll: true, noneIsAll: $(this).hasClass('filterBy'), maxDropHeight: filterByMaxHeight(this) });
     });
 
     // Put navigation links in top corner
     navigationLinksSetup();
 });