776cb277b9276d0e67012858fb28a1b143f1de41 cline Tue Jan 24 13:53:55 2012 -0800 Made the description of the protein field more generic, reflecting that the protein accession might or might not be the UniProt ID diff --git src/hg/lib/knownCanonical.sql src/hg/lib/knownCanonical.sql index 3a7685e..c70a908 100644 --- src/hg/lib/knownCanonical.sql +++ src/hg/lib/knownCanonical.sql @@ -1,18 +1,18 @@ # knownCanonical.sql was originally generated by the autoSql program, which also # generated knownCanonical.c and knownCanonical.h. This creates the database representation of # an object which can be loaded and saved from RAM in a fairly # automatic way. #Describes the canonical splice variant of a gene CREATE TABLE knownCanonical ( chrom varchar(255) not null, # Chromosome chromStart int not null, # Start position (0 based). Represents transcription start for + strand genes, end for - strand genes chromEnd int not null, # End position (non-inclusive). Represents transcription end for + strand genes, start for - strand genes clusterId int not null, # Which cluster of transcripts this belongs to in knownIsoforms transcript varchar(255) not null, # Corresponds to knownGene name field. - protein varchar(255) not null, # UniProt ID of the associated protein, if any. + protein varchar(255) not null, # Accession of the associated protein, if any. #Indices UNIQUE(clusterId), INDEX(transcript(12)), INDEX(protein(12)) );