5b86b4d934e15f2dea1a77162c1b6a8cc75229a2 hiram Thu Jan 26 16:02:51 2012 -0800 changing name of table genes_raw to rgdGene2Raw diff --git src/hg/lib/rgdGene2Raw.sql src/hg/lib/rgdGene2Raw.sql new file mode 100644 index 0000000..cc99387 --- /dev/null +++ src/hg/lib/rgdGene2Raw.sql @@ -0,0 +1,46 @@ +# raw data file downloaded from RGD for RGD Genes +CREATE TABLE rgdGene2Raw ( +gene_rgd_id varchar(255), +symbol varchar(255), +name varchar(255), +gene_desc text, +chromosome_celera varchar(255), +chromosome_31 varchar(255), +chromosome_34 varchar(255), +fish_band varchar(255), +start_pos_celera varchar(255), +stop_pos_celera varchar(255), +strand_celera varchar(255), +start_pos_31 varchar(255), +stop_pos_31 varchar(255), +strand_31 varchar(255), +start_pos_34 varchar(255), +stop_pos_34 varchar(255), +strand_34 varchar(255), +curated_ref_rgd_id text, +curated_ref_pubmed_id text, +uncurated_pubmed_id text, +ratmap_id varchar(255), +entrez_gene varchar(255), +uniprot_id text, +rhdb_id text, +uncurated_ref_medline_id text, +genbank_nucleotide text, +tigr_id text, +genbank_protein text, +unigene_id text, +gdb_id text, +sslp_rgd_id text, +sslp_symbol text, +old_symbol text, +old_name text, +qtl_rgd_id text, +qtl_symbol text, +nomenclature_status text, +splice_rgd_id text, +splice_symbol text, +gene_type varchar(255), +ensembl_id text, + KEY(gene_rgd_id), + KEY(symbol) +);