5b86b4d934e15f2dea1a77162c1b6a8cc75229a2
hiram
  Thu Jan 26 16:02:51 2012 -0800
changing name of table genes_raw to rgdGene2Raw
diff --git src/hg/lib/rgdGene2Raw.as src/hg/lib/rgdGene2Raw.as
new file mode 100644
index 0000000..ed70538
--- /dev/null
+++ src/hg/lib/rgdGene2Raw.as
@@ -0,0 +1,42 @@
+table rgdGene2Raw
+"Raw data GENES_RAT from RGD"
+(
+string 	GENE_RGD_ID;	"the RGD_ID of the gene"
+string 	SYMBOL;	"official gene symbol"
+string 	NAME;	"gene name"
+string 	GENE_DESC;	"gene description (if available)"
+string 	CHROMOSOME_CELERA;	"chromosome for Celera assembly"
+string 	CHROMOSOME_OLD_REF;	"chromosome for the old reference assembly"
+string 	CHROMOSOME_NEW_REF;	"chromosome for the current reference assembly"
+string 	FISH_BAND;	"fish band information"
+string 	START_POS_CELERA;	"start position for Celera assembly"
+string 	STOP_POS_CELERA;	"stop position for Celera assembly"
+string 	STRAND_CELERA;	"strand information for Celera assembly"
+string 	START_POS_OLD_REF;	"start position for old reference assembly"
+string 	STOP_POS_OLD_REF;	"stop position for old reference assembly"
+string 	STRAND_OLD_REF;	"strand information for old reference assembly"
+string 	START_POS_NEW_REF;	"start position for current reference assembly"
+string 	STOP_POS_NEW_REF;	"stop position for current reference assembly"
+string 	STRAND_NEW_REF;	"strand information for current reference assembly"
+string 	CURATED_REF_RGD_ID;	"RGD_ID of paper(s) on gene"
+string 	CURATED_REF_PUBMED_ID;	"PUBMED_ID of paper(s) on gene"
+string 	UNCURATED_PUBMED_ID;	"other PUBMED ids"
+string 	ENTREZ_GENE;	"EntrezGene id"
+string 	UNIPROT_ID;	"UniProtKB id(s)"
+string 	UNCURATED_REF_MEDLINE_ID;	"Uncurated Ref Medline ID"
+string 	GENBANK_NUCLEOTIDE;	"GenBank Nucleotide ID(s)"
+string 	TIGR_ID;	"TIGR ID(s)"
+string 	GENBANK_PROTEIN;	"GenBank Protein ID(s)"
+string 	UNIGENE_ID;	"UniGene ID(s)"
+string 	SSLP_RGD_ID;	"RGD_ID(s) of SSLPS associated with given gene"
+string 	SSLP_SYMBOL;	"SSLP symbol"
+string 	OLD_SYMBOL;	"old symbol alias(es)"
+string 	OLD_NAME;	"old name alias(es)"
+string 	QTL_RGD_ID;	"RGD_ID(s) of QTLs associated with given gene"
+string 	QTL_SYMBOL;	"QTL symbol"
+string 	NOMENCLATURE_STATUS;	"nomenclature status"
+string 	SPLICE_RGD_ID;	"RGD_IDs for gene splices"
+string 	SPLICE_SYMBOL;	"Splice Symbol"
+string 	GENE_TYPE;	"gene type"
+string 	ENSEMBL_ID;	"Ensembl Gene ID"
+)