2ff6da915576b068ad5fb7ec845b9690f128d931 donnak Wed Feb 1 16:35:28 2012 -0800 Updated people + content. diff --git src/hg/htdocs/staff.html src/hg/htdocs/staff.html index de645d6..98034b7 100755 --- src/hg/htdocs/staff.html +++ src/hg/htdocs/staff.html @@ -15,280 +15,279 @@ <TR><TD COLSPAN=2 CELLPADDING=10> <!--outer table is for border purposes--> <TABLE WIDTH="100%" BGCOLOR="#888888" BORDER="0" CELLSPACING="0" CELLPADDING="1"><TR><TD> <TABLE BGCOLOR="fffee8" WIDTH="100%" BORDER="0" CELLSPACING="0" CELLPADDING="0"><TR><TD> <TABLE BGCOLOR="D9E4F8" BACKGROUND="images/hr.gif" WIDTH=100%><TR><TD> <FONT SIZE="4"><b> UCSC Genome Browser Project Team</b></FONT> </TD></TR></TABLE> <TABLE BGCOLOR="fffee8" WIDTH="100%" CELLPADDING=0><TR><TH HEIGHT=10></TH></TR> <TR><TD WIDTH=10> </TD><TD> <B>UCSC Genome Browser Project Staff:</B> <UL> <LI> <A HREF="http://www.soe.ucsc.edu/~kent" TARGET=_blank>Jim Kent</A>: Research Scientist, - co-PI and architect of UCSC Genome Browser and + Co-PI and Architect of UCSC Genome Browser and ENCODE DCC projects. Design and implementation of the <A HREF="cgi-bin/hgGateway" TARGET=_blank>Genome Browser</A> and the <A HREF="cgi-bin/hgBlat?command=start" TARGET=_blank>BLAT</A> sequence search tool. Author of the the <A HREF="http://bioinformatics.oxfordjournals.org/cgi/content/abstract/btl048?ijkey=qbTw0578H4cXuFw&keytype=ref" TARGET=_blank>UCSC Genes</A> annotations, the <A HREF="cgi-bin/hgNear">Gene Sorter</A>, <A HREF="cgi-bin/hgVisiGene" TARGET=_blank>VisiGene</A>, <A HREF="cgi-bin/hgGenome">Genome Graphs</A>, chaining and netting programs, <A HREF="http://bioinformatics.oxfordjournals.org/content/26/17/2204.abstract" TARGET=_blank>bigWig and bigBed formats</A>, the <A HREF="cgi-bin/hgPcr">In Silico PCR</A> tool, and the <A HREF="http://www.genome.org/cgi/content/abstract/GR-1832Rv1" TARGET=_blank>GigAssembler</A>. <LI> <A HREF="mailto:galt@soe.ucsc.edu" TARGET=_blank>Galt Barber</A>: - Genome Browser and ENCODE DCC engineering. + Genome Browser and ENCODE DCC Engineer. <LI> <A HREF="mailto:hiram@soe.ucsc.edu" TARGET=_blank>Hiram Clawson</A>: - Genome Browser engineering. Wiki support, + Genome Browser Engineer. Wiki support, mirror and licensing technical support, modENCODE. <LI> <A HREF="mailto:cline@soe.ucsc.edu" TARGET=_blank>Melissa Cline</A>: - ENCODE DCC and Genome Browser engineering. + ENCODE DCC and Genome Browser Engineer. <LI> <A HREF="mailto:markd@soe.ucsc.edu" TARGET_blank>Mark Diekhans</A>: - Genome Browser technical engineering lead. Gencode, - CCDS, MGC projects. Genome Browser GenBank data - pipeline. PhD student. + Tecnical Project Manager, Engineer, PhD student. + Gencode, CCDS, and MGC projects, author of Genome + Browser GenBank data pipeline. <LI> <A HREF="mailto:tdreszer@soe.ucsc.edu" TARGET=_blank>Tim Dreszer</A>: - ENCODE DCC and Genome Browser engineering. + ENCODE DCC and Genome Browser Engineer. + <LI> + <A HREF="mailto:fang@soe.ucsc.edu" + TARGET=_blank>Ruihua Fang</A>: + ENCODE DCC Biological Data Engineer. <LI> <A HREF="mailto:pauline@soe.ucsc.edu" TARGET=_blank>Pauline Fujita</A>: Genome Browser QA, mailing list support. <LI> <A HREF="mailto:mary@soe.ucsc.edu" TARGET=_blank>Mary Goldman</A>: - Genome Browser QA, mailing list support. + Genome Browser and Cancer Browser QA, mailing list + support. <LI> <A HREF="mailto:luvina@soe.ucsc.edu" TARGET=_blank>Luvina Guruvadoo</A>: Genome Browser QA, mailing list support. <LI> <A HREF="mailto:hartera@soe.ucsc.edu" TARGET=_blank>Rachel Harte</A>: Gencode, CCDS, MGC curation. <LI> <A HREF="mailto:steve@soe.ucsc.edu" TARGET=_blank>Steve Heitner</A>: Genome Browser QA, mailing list support. <LI> <A HREF="mailto:angie@soe.ucsc.edu" TARGET=_blank>Angie Hinrichs</A>: - Genome Browser engineering, SNPs and variation data, + Genome Browser Engineer, SNPs and variation data, modENCODE. <LI> <A HREF="mailto:fanhsu@soe.ucsc.edu" TARGET=_blank>Fan Hsu</A>: - Genome Browser engineering. Director of Proteomics. GSID. + Genome Browser Engineer. Director of Proteomics. GSID. <LI> <A HREF="mailto:donnak@soe.ucsc.edu" TARGET=_blank>Donna Karolchik</A>: Genome Browser program and engineering management, documentation, web content, Genome Browser licensing. <LI> <A HREF="mailto:kuhn@soe.ucsc.edu" TARGET=_blank>Robert Kuhn</A>: - Genome Browser associate director, QA manager, - training and outreach. + Genome Browser Associate Director, training and outreach + program. <LI> <A HREF="mailto:katrina@soe.ucsc.edu" TARGET=_blank>Katrina Learned</A>: - ENCODE DCC QA lead, Genome Browser QA, mailing list - support. + Genome Browser QA Manager, Genome Browser and ENCODE QA. <LI> <A HREF="mailto:chinhli@soe.ucsc.edu" TARGET=_blank>Chin Li</A>: - Genome Browser engineering. + Genome Browser Engineer. <LI> <A HREF="mailto:vsmalladi@soe.ucsc.edu" TARGET=_blank>Venkat Malladi</A>: - ENCODE DCC biological data technician. + ENCODE DCC Biological Data Technician. <LI> <A HREF="mailto:larrym@soe.ucsc.edu" TARGET=_blank>Larry Meyer</A>: - Genome Browser and ENCODE DCC engineering. + Genome Browser and ENCODE DCC Engineer. <LI> <A HREF="mailto:tom@cyber-dyne.com">Thomas Pringle</A>: Genome Browser technical advisor and power user. <LI> <A HREF="mailto:braney@soe.ucsc.edu" TARGET=_blank>Brian Raney</A>: - Genome Browser and ENCODE DCC engineering. + Genome Browser and ENCODE DCC Engineer. <LI> <A HREF="mailto:rhead@soe.ucsc.edu" TARGET=_blank>Brooke Rhead</A>: - Genome Browser QA lead, mailing list support. + Genome Browser QA Lead, mailing list support. <LI> <A HREF="mailto:greg@soe.ucsc.edu" TARGET=_blank>Greg Roe</A>: Genome Browser QA, mailing list support. <LI> <A HREF="mailto:kate@soe.ucsc.edu" TARGET=_blank>Kate Rosenbloom</A>: - ENCODE DCC technical project manager. Genome Browser - engineering. + ENCODE DCC Technical Project Manager, Genome Browser + and ENCODE DCC Engineer. <LI> <A HREF="mailto:cricket@soe.ucsc.edu" TARGET=_blank>Cricket Alicia Sloan</A>: - ENCODE DCC biological data technician. + ENCODE DCC Team Coordinator, ENCODE DCC Biological Data + Technician. <LI> <A HREF="mailto:vanessa@soe.ucsc.edu" TARGET=_blank>Vanessa Swing</A>: ENCODE DCC and Genome Browser QA, mailing list support. <LI> <A HREF="mailto:wong@soe.ucsc.edu" TARGET=_blank>Matt Wong</A>: - ENCODE DCC biological data technician. + ENCODE DCC Biological Data Technician. <LI> <A HREF="mailto:ann@soe.ucsc.edu" TARGET=_blank>Ann Zweig</A>: - Genome Browser technical project manager, mailing list manager. + Genome Browser Technical Project Manager, mailing list + coordinator. </UL> <P> - <B>Post-docs and Graduate Students (Browser-related support):</B> + <B>Postdocs and Graduate Students (Browser-related support):</B> <UL> <LI> - <A HREF="http://www.soe.ucsc.edu/~sbenz/" - TARGET=_blank>Steve Benz</A>: - Graduate student - Cancer genomics browser. + <A HREF="mailto:max@soe.ucsc.edu" + TARGET=_blank>Max Haeussler</A>: + Postdoc - Tools to mine online biomedical articles and + documents for DNA/protein sequence and map to genomes. + <LI> + <A HREF="mailto:kehayden@soe.ucsc.edu" + TARGET=_blank>Karen Hayden</A>: + Postdoc - Characterization and annotation of human + centromeric regions in genome. <LI> <A HREF="mailto:jlong@soe.ucsc.edu" TARGET=_blank>Jeff Long</A>: Graduate student - Assistance with ENCODE DCC data wrangling. <LI> <A HREF="mailto:mmaddren@soe.ucsc.edu" TARGET=_blank>Morgan Maddren</A>: Undergraduate student - Assistance with ENCODE DCC data wrangling. <LI> - <A HREF="mailto:benedict@soe.ucsc.edu" - TARGET=_blank>Benedict Paten</A>: - Graduate student - ENCODE DAC, comparative genomics and - evolutionary analysis. - <LI> - <A HREF="http://www.cse.ucsc.edu/~krish" TARGET=_blank>Krishna Roskin</A>: - PhD - ENCODE DCC GEO support, Phylogenetic analysis, Genome - Browser database support, early Table Browser support. - <LI> - <A HREF="http://www.soe.ucsc.edu/~jsanborn/" - TARGET=_blank>Zack Sanborn</A>: - Graduate student - Cancer genomics browser. -<!-- - <LI> - <A HREF="http://www.soe.ucsc.edu/~bsuh/" - TARGET=_blank>Bernard Suh</A>: - Graduate student - Reconstruction of evolutionary - trees, ENCODE DCC. ---> - <LI> - <A HREF="mailto:jzhu@soe.ucsc.edu" - TARGET=_blank>Jing Zhu</A>: - Cancer genomics browser project manager. + <A HREF="mailto:nash@soe.ucsc.edu" + TARGET=_blank>Max Nash</A>: + Undergraduate student - Assistance with ENCODE DCC + data wrangling. + <LI> + <A HREF="mailto:zwzhang@soe.ucsc.edu" + TARGET=_blank>Zheng-Willy Zhang</A>: + Undergraduate student - Assistance with ENCODE DCC + data wrangling. </UL> <P> <B>Systems Administration Staff:</B> <UL> <LI> <A HREF="mailto:jgarcia@soe.ucsc.edu" TARGET=_blank>Jorge Garcia</A>: - Systems administrator. + Systems Administrator. <LI> <A HREF="mailto:gary@soe.ucsc.edu" TARGET=_blank>Gary Moro</A>: - Systems administrator. + Systems Administrator. <LI> <A HREF="mailto:weiler@soe.ucsc.edu" TARGET=_blank>Erich Weiler</A>: - Systems administrator. + Systems Administrator. <LI> <A HREF="mailto:tbchan@soe.ucsc.edu" TARGET=_blank>Truman Chan</A>: - Student systems administrator. + Student Systems Administrator. </UL> <P> <B>Center for Biomolecular Science and Engineering (<A HREF="http://www.cbse.ucsc.edu/" TARGET=_blank>CBSE</A>) Staff:</B> <UL> <LI> <A HREF="http://www.cbse.ucsc.edu/people/haussler" TARGET=_blank>David Haussler</A>: CBSE Director, HHMI - investigator, co-PI of UCSC Genome Browser project. + investigator, Co-PI of UCSC Genome Browser project. <LI> <A HREF="mailto:pace@soe.ucsc.edu" TARGET=_blank>Ann Pace</A>: CBSE Associate Director. <LI> <A HREF="mailto:lbrazil@soe.ucsc.edu" TARGET=_blank>Lynn Brazil</A>: Executive Assistant. <LI> <A HREF="mailto:rochelle@soe.ucsc.edu" TARGET=_blank>Rochelle Fuller</A>: Administrative Specialist. <LI> <A HREF="mailto:ngassner@soe.ucsc.edu" TARGET=_blank>Nadine Gassner</A>: - CBSE Grant Program Administrator. + Grant Program Administrator. <LI> <A HREF="mailto:dngomez@ucsc.edu" TARGET=_blank>Danielle Gomez</A>: - CBSE Administrative Assistant/Receptionist. + Administrative Assistant/Receptionist. <LI> <A HREF="mailto:isola@soe.ucsc.edu" TARGET=_blank>Zia Isola</A>: Associate Director for CBSE Diversity Programs. <LI> - <A HREF="mailto:srose@soe.ucsc.edu" - TARGET=_blank>Susan Rose</A>: - Temporary Administrative Staff. + <A HREF="mailto:lilia@soe.ucsc.edu" + TARGET=_blank>Lilia Sandoval</A>: + Administrative Assistant. <LI> <A HREF="mailto:ksauder@soe.ucsc.edu" TARGET=_blank>Kelly Sauder</A>: Financial Specialist. <LI> <A HREF="mailto:bwagman@soe.ucsc.edu" TARGET=_blank>Branwyn Wagman</A>: Associate Director for Operations and Communications. </UL> <P> <P> We gratefully acknowledge the help of project alumni - Robert Baertsch, Gill Bejerano, Mathieu Blanchette, - Brenna Candelaria, Mike Chalup, Chad + Robert Baertsch, Steve Benz, Gill Bejerano, Mathieu + Blanchette, Brenna Candelaria, Mike Chalup, Chad Chen, Ron Chao, Vege Clerisse, Antonio Coelho, Jenny Draper, - Phoenix Eagleshadow, Katy Elliott, Terry Furey, Patrick Gavin, Rob Gravell, - Jennifer Jackson, Scot Kennedy, Andy Kern, Victoria Lin, Nick Littlestone, - Craig Lowe, Yontao Lu, Crystal Lynch, Jian Ma, Chester Manuel, Jakob - Pedersen, + Phoenix Eagleshadow, Katy Elliott, Terry Furey, + Patrick Gavin, Rob Gravell, Jennifer Jackson, Scot Kennedy, + Andy Kern, Victoria Lin, Nick Littlestone, + Craig Lowe, Yontao Lu, Crystal Lynch, Jian Ma, Chester + Manuel, Jakob Pedersen, Mike Pheasant, Andy Pohl, Katie Pollard, Ruth Rabinowitz, - Sanja Rogic, Matt Schwartz, Adam Siepel, Kayla Smith, - Chuck Sugnet, + Sanja Rogic, Susan Rose, Krishna Roskin, Zack Sanborn, Matt + Schwartz, Adam Siepel, Kayla Smith, Chuck Sugnet, Bernard Suh, Ali Sultan-Qurraie, Paul Tatarksy, Archana Thakkapallayil, Daryl Thomas, Aaron Tomb, Heather Trumbower, Sandra Walton, Ting Wang, Ryan Weber, Alexander Wolfe, Wei Wu, Matt Xia, Chen-Hsiang Yeang, and Degui Zhi. <BR> </TD><TD WIDTH=15></TD></TR></TABLE> <br></TD></TR></TABLE> </TD></TR></TABLE> </TD></TR></TABLE> </BODY></HTML>