File Changes for wong

v264_preview2 to v264_base (2012-02-28 to 2012-03-06) v264

• src/hg/encode/qaEncodeTracks2/makefile
  • lines changed 1, context: html, text, full: html, text
    moved over ot name qaEncodeTracks2
• src/hg/encode/qaEncodeTracks2/qaEncodeTracks
  • lines changed 78, context: html, text, full: html, text
    moved over ot name qaEncodeTracks2
• src/hg/encode/qaEncodeTracks2/qaEncodeTracks2
  • lines changed 78, context: html, text, full: html, text
    moved over ot name qaEncodeTracks2
  • lines changed 4, context: html, text, full: html, text
    changed usage to be correct
• src/hg/makeDb/doc/encodeDccHg19/wgEncodeOpenChromDnase.release2.notes
  • lines changed 326, context: html, text, full: html, text
    updateing notes
• src/hg/makeDb/doc/encodeDccHg19/wgEncodeUwDnase.release4.notes
  • lines changed 1908, context: html, text, full: html, text
    first draft of notes for UwDnase
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/makefile
  • lines changed 1, context: html, text, full: html, text
    adding haib bisulfite into makefile
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeHaibMethylWgbs.ra
  • lines changed 69, context: html, text, full: html, text
    added in new tracks to new wgbs track
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromDnase.ra
  • lines changed 197, context: html, text, full: html, text
    replaced K562 experiment
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwDnase.ra
  • lines changed 181, context: html, text, full: html, text
    added in expIds
  • lines changed 521, context: html, text, full: html, text
    fixing gzip md5 debacle
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwTfbs.ra
  • lines changed 83, context: html, text, full: html, text
    fixing control ids
• src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibMethylWgbs.html
  • lines changed 13, context: html, text, full: html, text
    added in html
• src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibMethylWgbs.ra
  • lines changed 44, context: html, text, full: html, text
    added in new tracks to new wgbs track
• src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromDnase.release2.ra
  • lines changed 48, context: html, text, full: html, text
    replaced K562 experiment
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release4.html
  • lines changed 25, context: html, text, full: html, text
    qa fixes for uw dnase
  • lines changed 1, context: html, text, full: html, text
    changing release date to match month
  • lines changed 2, context: html, text, full: html, text
    qa fixes
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release4.ra
  • lines changed 3, context: html, text, full: html, text
    shortening too long of short label
  • lines changed 15, context: html, text, full: html, text
    qa fixes for uw dnase
  • lines changed 1, context: html, text, full: html, text
    fixed html code for label
  • lines changed 2, context: html, text, full: html, text
    changing scorefilter to 0
  • lines changed 2, context: html, text, full: html, text
    changing scorefilterlimit to 500
  • lines changed 1, context: html, text, full: html, text
    correcting html entity
  • lines changed 10, context: html, text, full: html, text
    changed tag for MONOCD14
  • lines changed 67, context: html, text, full: html, text
    fixed alphabetization of cell lines
  • lines changed 19, context: html, text, full: html, text
    fixing the alphabetizion again for dashes
  • lines changed 1, context: html, text, full: html, text
    qa fixes
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwTfbs.release3.html
  • lines changed 1, context: html, text, full: html, text
    changing release date to match month
  • lines changed 1, context: html, text, full: html, text
    this one didn't need the date change
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwTfbs.release3.ra
  • lines changed 1, context: html, text, full: html, text
    fixed some stuff according to QA