File Changes for cricket
switch to commits view, user indexv263_base to v264_preview (2012-02-14 to 2012-02-21) v264
- src/hg/encode/DAFs/3.0/hg19/wgEncodeCshlLongRnaSeq.daf
- src/hg/encode/DAFs/3.0/hg19/wgEncodeHaibMethylWgbs.daf
- lines changed 38, context: html, text, full: html, text
Adding a daf for new file
- lines changed 2, context: html, text, full: html, text
Correcting the CpG to CpGSites for clarity
- src/hg/encode/DAFs/3.0/hg19/wgEncodeUncBsuProt.daf
- lines changed 9, context: html, text, full: html, text
Getting submission 5558 in and adding the structure for a new view
- src/hg/encode/encodeValidate/doEncodeValidate.pl
- lines changed 1, context: html, text, full: html, text
We do not allow .doc because they are proprietary, I think that this was meant to mean type document (generic), but it was being interpreted and used to submit Word doc. So I am changing it to pdf. We may need to change it back or come up with something for none pdf documents.
- src/hg/makeDb/doc/encodeDccHg19/wgEncodeCshlShortRnaSeq.release2.notes
- lines changed 304, context: html, text, full: html, text
New release notes adding the protocol docs
- src/hg/makeDb/trackDb/cv/alpha/cv.ra
- lines changed 19, context: html, text, full: html, text
Adding the terms for the WGBS track
- lines changed 2, context: html, text, full: html, text
Correcting the CpG to CpGSites for clarity
- lines changed 7, context: html, text, full: html, text
Adding and fixing terms for the Proteogenomics group
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra
- lines changed 276, context: html, text, full: html, text
Adding the V2 files for the bedRnaElements files that had . in the score
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlShortRnaSeq.ra
- lines changed 2159, context: html, text, full: html, text
Adding protocols and fixing the trackDb to have new defualts and to have filterComposite
- lines changed 699, context: html, text, full: html, text
Removing release 3 protocols, adding one more release 1
- lines changed 101, context: html, text, full: html, text
Adding missing readType and origAssembly
- src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUncBsuProt.ra
- lines changed 24, context: html, text, full: html, text
Getting submission 5558 in and adding the structure for a new view
- lines changed 20, context: html, text, full: html, text
Trying to add bigBeds, but having issues. Checking it in for others to work on
- src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.release2.html
- lines changed 4, context: html, text, full: html, text
Changing links to be relative
- src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.release2.ra
- lines changed 205, context: html, text, full: html, text
Adding the V2 files for the bedRnaElements files that had . in the score
- src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.new.html
- lines changed 138, context: html, text, full: html, text
This file was replaced a long time ago with .release2
- src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.release2.html
- lines changed 4, context: html, text, full: html, text
Changing links to be relative
- lines changed 2, context: html, text, full: html, text
Some html changes for Jacob, cleaning up some metaData to be consistent.
- lines changed 14, context: html, text, full: html, text
http://redmine.soe.ucsc.edu/issues/1634#note-111, A bunch of html
- lines changed 3, context: html, text, full: html, text
Changed the release policy
- src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.release2.ra
- lines changed 1, context: html, text, full: html, text
Some html changes for Jacob, cleaning up some metaData to be consistent.
- lines changed 53, context: html, text, full: html, text
Adding protocols and fixing the trackDb to have new defualts and to have filterComposite
- lines changed 204, context: html, text, full: html, text
Changing the tags back to starting with 1 and 2 because a and b did not work as expected
- src/hg/makeDb/trackDb/human/hg19/wgEncodeUncBsuProt.release2.ra
- lines changed 47, context: html, text, full: html, text
Getting submission 5558 in and adding the structure for a new view
- lines changed 14, context: html, text, full: html, text
Trying to add bigBeds, but having issues. Checking it in for others to work on
- src/hg/makeDb/trackDb/tagTypes.tab
- lines changed 1, context: html, text, full: html, text
Adding the bigDataUrl for bigBed bam and bigWig
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