64077a1b353acc0de28a97725bec40beb47e8afe
wong
  Tue Feb 14 16:20:28 2012 -0800
forgot to also remove revoked tables from the change table status set, possibly need to remove attic, but i'll do it if the problem comes up
diff --git python/lib/ucscgenomics/mkChangeNotes.py python/lib/ucscgenomics/mkChangeNotes.py
index 443b1c4..00b76eb 100644
--- python/lib/ucscgenomics/mkChangeNotes.py
+++ python/lib/ucscgenomics/mkChangeNotes.py
@@ -601,31 +601,31 @@
             errors.extend(self.__checkMd5sums())
 
             #checks and gets tables that are present, also returns a revoked set of tables for new
             if self.verbose >= 1:
                 sys.stderr.write("Checking table status\n")
             (self.newTableSet, self.revokedTableSet, self.newMissingTables, newTableError) = self.checkTableStatus("alpha metaDb", "new")
             (self.oldTableSet, spam, self.droppedTables, oldTableError) = self.checkTableStatus("public metaDb", "old")
 
             
 
             self.newInAttic = self.atticSet - self.oldAtticSet
             self.stillInAttic = self.oldAtticSet & self.atticSet
             self.oldTableSet = self.oldTableSet - self.atticSet
             self.noMoreAttic = self.oldAtticSet - self.atticSet
 
-            self.changedTables = self.oldTableSet - self.newTableSet
+            self.changedTables = self.oldTableSet - self.newTableSet - self.revokedTableSet
 
 
             #same as above except for gbdbs
             if self.verbose >= 1:
                 sys.stderr.write("Checking GBDB status\n")
             (self.newGbdbSet, self.revokedGbdbs, newGbdbError) = self.getGbdbFiles("new")
             (self.oldGbdbSet, eggs, oldGbdbError) = self.getGbdbFiles("old")
             #remove missing files from gbdbs
             self.oldGbdbSet = self.oldGbdbSet - self.missingFiles
             self.oldGbdbSet = self.oldGbdbSet - self.atticSet
             self.changedGbdbs = self.oldGbdbSet - self.newGbdbSet
             for i in self.missingFiles:
                 if i in self.oldReleaseFiles:
                     del self.oldReleaseFiles[i]