Commits for fang

v264_preview to v264_preview2 (2012-02-21 to 2012-02-28) v264

• changed the value of required field to no in alignment and raw signal views so that Lee can just reload the peak files
  • src/hg/encode/DAFs/3.0/mm9/wgEncodeLicrHistone.daf - lines changed 3, context: html, text, full: html, text
• changed the value of required field to no in alignment and raw signal views so that Lee can just reload the peak files
  • src/hg/encode/DAFs/3.0/mm9/wgEncodeLicrTfbs.daf - lines changed 3, context: html, text, full: html, text
• updated the expId and dccAccession number for those new experiments submitted for release 2
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrHistone.ra - lines changed 411, context: html, text, full: html, text
• resolving merge conflict caused by magic number, redo mdbUpdate etc
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrHistone.ra - lines changed 2, context: html, text, full: html, text
• added stanza for Thymus H3K4me1 peak, submission ID 5755
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.ra - lines changed 9, context: html, text, full: html, text
• added stanza for Thymus H3K4me1 peak, submission ID 5755
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrHistone.ra - lines changed 27, context: html, text, full: html, text
• update newly submitted peak files
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrHistone.ra - lines changed 833, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.ra - lines changed 288, context: html, text, full: html, text
• update newly submitted signal and peak files for Liver E14.5 samples
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrHistone.ra - lines changed 599, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.ra - lines changed 63, context: html, text, full: html, text
• update newly submitted peak files
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrTfbs.ra - lines changed 287, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra - lines changed 99, context: html, text, full: html, text
• change input to INPUT in subGroup3 in top stanza
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra - lines changed 1, context: html, text, full: html, text
• change all the factor=Input to factor=INPUT in each stanza
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra - lines changed 10, context: html, text, full: html, text
• updated stanza for submission 5746, 5749, added PLAC entry to subGroup2 in top stanza
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra - lines changed 19, context: html, text, full: html, text
• added F=F to subGroup4 in top stanza
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra - lines changed 1, context: html, text, full: html, text
• updated all the newly submitted input signal files
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrTfbs.ra - lines changed 1171, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra - lines changed 63, context: html, text, full: html, text
• clean up long label
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrRnaSeq.release2.ra - lines changed 8, context: html, text, full: html, text
• clean up short and long label
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.ra - lines changed 156, context: html, text, full: html, text
• clean up short and long labels
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra - lines changed 107, context: html, text, full: html, text
• update with new submission
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrHistone.ra - lines changed 117, context: html, text, full: html, text