Commits for fang
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v264_base to v265_preview (2012-03-06 to 2012-03-13) v265
- remove stanza submitted in 03/12 and relevant changes
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrRnaSeq.release2.ra - lines changed 40, context: html, text, full: html, text
- remove treatment=None from all the stanza after removing treatment from the parent treatment subgroup
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrRnaSeq.release2.ra - lines changed 76, context: html, text, full: html, text
- remove stanz of macrophages derived from bone marrow and related entries: stanzas, treatment subgroups, age=IMMORT, treatment=None
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.ra - lines changed 219, context: html, text, full: html, text
- remove entries related with macrophages derived from bone marrow: stanzas, treatment subgroup, age=IMMORT, treatment=None
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra - lines changed 133, context: html, text, full: html, text
- update metaDb with new submissions
- src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrHistone.ra - lines changed 1847, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrRnaSeq.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrTfbs.ra - lines changed 131, context: html, text, full: html, text
- clean up long label
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra - lines changed 2, context: html, text, full: html, text
- clean up short, long labels
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.ra - lines changed 177, context: html, text, full: html, text
- added IMMORTAL=immortalized in age subgroup
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrRnaSeq.release2.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra - lines changed 1, context: html, text, full: html, text
- add new MEL submission data
- src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrHistone.ra - lines changed 1223, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrRnaSeq.ra - lines changed 155, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrTfbs.ra - lines changed 443, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.ra - lines changed 135, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrRnaSeq.release2.ra - lines changed 38, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra - lines changed 45, context: html, text, full: html, text
- clean up short and long labels
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.ra - lines changed 31, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrRnaSeq.release2.ra - lines changed 9, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra - lines changed 98, context: html, text, full: html, text
- clean up shorlabels
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra - lines changed 5, context: html, text, full: html, text
- add age as selected dimensions
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.ra - lines changed 1, context: html, text, full: html, text
- add filterComposite dimensionA=multi
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.ra - lines changed 1, context: html, text, full: html, text
- add age as multi-selectable dimension
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra - lines changed 2, context: html, text, full: html, text
- update with new submission, clean up short, long label
- src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrRnaSeq.ra - lines changed 155, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrRnaSeq.release2.ra - lines changed 36, context: html, text, full: html, text
- rm treatment as variable after renaming bone marrow derived macrophage to BMDM as the treatment was part of the process of making the marcrophage
- src/hg/encode/DAFs/3.0/mm9/wgEncodeLicrHistone.daf - lines changed 4, context: html, text, full: html, text
- src/hg/encode/DAFs/3.0/mm9/wgEncodeLicrRnaSeq.daf - lines changed 4, context: html, text, full: html, text
- src/hg/encode/DAFs/3.0/mm9/wgEncodeLicrTfbs.daf - lines changed 4, context: html, text, full: html, text
- made release2 html by copying release1 html
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.html - lines changed 189, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.html - lines changed 189, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra - lines changed 1, context: html, text, full: html, text
- added information of new sample, new experiments for the new submission, added release note to Histone and Tfbs
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.html - lines changed 36, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrRnaSeq.release2.html - lines changed 9, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.html - lines changed 40, context: html, text, full: html, text
- update viewLimits
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.ra - lines changed 55, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrRnaSeq.release2.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra - lines changed 24, context: html, text, full: html, text
- set default displaying subtracks
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.ra - lines changed 75, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrRnaSeq.release2.ra - lines changed 18, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra - lines changed 43, context: html, text, full: html, text
- change defult peak display from dense to pack
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra - lines changed 1, context: html, text, full: html, text
- changed peak visibility default to dense
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.ra - lines changed 2, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra - lines changed 1, context: html, text, full: html, text
- update new submission of BMDM cells
- src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrHistone.ra - lines changed 599, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrRnaSeq.ra - lines changed 155, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrTfbs.ra - lines changed 443, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.ra - lines changed 64, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrRnaSeq.release2.ra - lines changed 37, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra - lines changed 46, context: html, text, full: html, text
- clean up short, long labels for new submission of BMDM cells
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.ra - lines changed 17, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrRnaSeq.release2.ra - lines changed 8, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra - lines changed 12, context: html, text, full: html, text
- add expId for the new submissions
- src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrHistone.ra - lines changed 283, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrRnaSeq.ra - lines changed 37, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrTfbs.ra - lines changed 79, context: html, text, full: html, text
- update release note to inlcude newly submitted experiments
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.html - lines changed 4, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrRnaSeq.release2.html - lines changed 4, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.html - lines changed 4, context: html, text, full: html, text
- update release notes
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.html - lines changed 3, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrRnaSeq.release2.html - lines changed 3, context: html, text, full: html, text
- update release note
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.html - lines changed 3, context: html, text, full: html, text
- change visibility from defaults setting of dense to pack
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.ra - lines changed 1, context: html, text, full: html, text
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra - lines changed 1, context: html, text, full: html, text
- clean up long label in title
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrRnaSeq.release2.ra - lines changed 1, context: html, text, full: html, text
- added md5sums with encodeMkFilesList
- src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrRnaSeq.ra - lines changed 19, context: html, text, full: html, text
- create notes file
- src/hg/makeDb/doc/encodeDccMm9/wgEncodeLicrRnaSeq.release2.notes - lines changed 437, context: html, text, full: html, text
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