File Changes for steve

v264_base to v265_preview (2012-03-06 to 2012-03-13) v265

• src/hg/htdocs/ENCODE/downloads.html
  • lines changed 5, context: html, text, full: html, text
    Added line for GENCODE V11 (redmine #6775)
• src/hg/makeDb/trackDb/human/hg18/metaDb/beta/wgEncodeCaltechRnaSeq.ra
  • lines changed 902, context: html, text, full: html, text
    Matt made changes to hg18 metadata (redmine #6581)
• src/hg/makeDb/trackDb/human/hg18/metaDb/beta/wgEncodeChromatinMap.ra
  • lines changed 1534, context: html, text, full: html, text
    Matt made changes to hg18 metadata (redmine #6581)
• src/hg/makeDb/trackDb/human/hg18/metaDb/beta/wgEncodeHudsonalphaChipSeq.ra
  • lines changed 5483, context: html, text, full: html, text
    Matt made changes to hg18 metadata (redmine #6581)
• src/hg/makeDb/trackDb/human/hg18/metaDb/beta/wgEncodeNhgriBip.ra
  • lines changed 4, context: html, text, full: html, text
    Moving Cricket's metadata updates to beta and public (redmine #7117)
• src/hg/makeDb/trackDb/human/hg18/metaDb/beta/wgEncodeYaleChIPseq.ra
  • lines changed 32, context: html, text, full: html, text
    Matt made changes to hg18 metadata (redmine #6581)
• src/hg/makeDb/trackDb/human/hg18/metaDb/public/wgEncodeCaltechRnaSeq.ra
  • lines changed 902, context: html, text, full: html, text
    Matt made changes to hg18 metadata (redmine #6581)
• src/hg/makeDb/trackDb/human/hg18/metaDb/public/wgEncodeChromatinMap.ra
  • lines changed 1534, context: html, text, full: html, text
    Matt made changes to hg18 metadata (redmine #6581)
• src/hg/makeDb/trackDb/human/hg18/metaDb/public/wgEncodeHudsonalphaChipSeq.ra
  • lines changed 5483, context: html, text, full: html, text
    Matt made changes to hg18 metadata (redmine #6581)
• src/hg/makeDb/trackDb/human/hg18/metaDb/public/wgEncodeNhgriBip.ra
  • lines changed 4, context: html, text, full: html, text
    Moving Cricket's metadata updates to beta and public (redmine #7117)
• src/hg/makeDb/trackDb/human/hg18/metaDb/public/wgEncodeYaleChIPseq.ra
  • lines changed 32, context: html, text, full: html, text
    Matt made changes to hg18 metadata (redmine #6581)
• src/hg/makeDb/trackDb/human/hg19/metaDb/beta/makefile
  • lines changed 1, context: html, text, full: html, text
    Staging GENCODE V11 on beta (redmine #6775)
  • lines changed 1, context: html, text, full: html, text
    Releasing GENCODE V11 to RR. Also unstaging GENCODE V4. (redmine #6775)
• src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeGencodeV11.ra
  • lines changed 295, context: html, text, full: html, text
    Staging GENCODE V11 on beta (redmine #6775)
• src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeSydhHistone.ra
  • lines changed 58, context: html, text, full: html, text
    Matt made some metadata changes (redmine #6581)
• src/hg/makeDb/trackDb/human/hg19/metaDb/public/makefile
  • lines changed 2, context: html, text, full: html, text
    Releasing GENCODE V11 to RR. Also unstaging GENCODE V4. (redmine #6775)
• src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeGencodeV11.ra
  • lines changed 295, context: html, text, full: html, text
    Releasing GENCODE V11 to RR. Also unstaging GENCODE V4. (redmine #6775)
• src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeSydhHistone.ra
  • lines changed 58, context: html, text, full: html, text
    Matt made some metadata changes (redmine #6581)
• src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra
  • lines changed 1, context: html, text, full: html, text
    Staging GENCODE V11 on beta (redmine #6775)
  • lines changed 6, context: html, text, full: html, text
    Applied Matt's patches (redmine #7183)
  • lines changed 2, context: html, text, full: html, text
    Releasing GENCODE V11 to RR. Also unstaging GENCODE V4. (redmine #6775)
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV11.html
  • lines changed 4, context: html, text, full: html, text
    Corrected a spelling error. Added a link to the PubMed article that Mark D referenced for Exonerate. (redmine #6775)
  • lines changed 1, context: html, text, full: html, text
    Changed the text in the link to The GENCODE Project page in the Release Notes section (redmine #6775)
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.patch.ra
  • lines changed 1488, context: html, text, full: html, text
    Applied Matt's patches (redmine #7183)
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release3.ra
  • lines changed 13, context: html, text, full: html, text
    Applied Matt's patches (redmine #7183)
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwHistone.patch.ra
  • lines changed 5953, context: html, text, full: html, text
    Applied Matt's patches (redmine #7183)
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwHistone.release3.ra
  • lines changed 27, context: html, text, full: html, text
    Applied Matt's patches (redmine #7183)
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwTfbs.patch.ra
  • lines changed 3582, context: html, text, full: html, text
    Applied Matt's patches (redmine #7183)
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUwTfbs.release3.ra
  • lines changed 10, context: html, text, full: html, text
    Applied Matt's patches (redmine #7183)
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/beta/makefile
  • lines changed 1, context: html, text, full: html, text
    Added wgEncodeNhgriBip.ra to beta and modified beta makefile (redmine #7117)
  • lines changed 1, context: html, text, full: html, text
    Removed blank line from top of makefile
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/beta/wgEncodeNhgriBip.ra
  • lines changed 12, context: html, text, full: html, text
    Added wgEncodeNhgriBip.ra to beta and modified beta makefile (redmine #7117)
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/public/makefile
  • lines changed 2, context: html, text, full: html, text
    Moved .ra file from beta to public and added to public makefile (redmine #7117)
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/public/wgEncodeNhgriBip.ra
  • lines changed 15, context: html, text, full: html, text
    Moved .ra file from beta to public and added to public makefile (redmine #7117)