7f33fb42a1fb58a02a3f798e56332e5beac65133 max Sat Mar 17 13:21:09 2012 -0700 renaming all publications tracks tables to pubsXXXX diff --git src/hg/lib/pubsBlat.sql src/hg/lib/pubsBlat.sql new file mode 100644 index 0000000..404e815 --- /dev/null +++ src/hg/lib/pubsBlat.sql @@ -0,0 +1,19 @@ +#Text to Genome project feature table, in bed12+ format, additional field seqIds +CREATE TABLE `t2g` ( + `chrom` varchar(255) NOT NULL, # chromosome + `chromStart` int(10) unsigned NOT NULL, # start position on chromosome + `chromEnd` int(10) unsigned NOT NULL, # end position on chromosome + `name` varchar(255) NOT NULL, #name of feature + `score` int(10) unsigned NOT NULL, # score of feature + `strand` char(1) NOT NULL, # strand of feature + `thickStart` int(10) unsigned NOT NULL, # start of exons + `thickEnd` int(10) unsigned NOT NULL, #end of exons + `reserved` int(10) unsigned NOT NULL, # no clue + `blockCount` int(10) unsigned NOT NULL, # number of blocks + `blockSizes` longblob NOT NULL, # size of blocks + `chromStarts` longblob NOT NULL, # A comma-separated list of block starts + `seqIds` longblob NOT NULL, # comma-separated list of sequenceIds used to generate this feature + KEY `name` (`name`(16)), + KEY `chrom` (`chrom`(6)), + KEY `chromStartAndName` (`chrom`(6), chromStart, name) +);