File Changes for angie

v266_preview2 to v266_base (2012-04-17 to 2012-04-24) v266

• src/hg/hgVarAnnogrator/hgVarAnnogrator.c
  • lines changed 1296, context: html, text, full: html, text
    Feature #1652 (Variant Annotation Tool): First draft of UI: mostactions trigger an ajax call that sends a JSON description of the query (and what changed); the response is a JSON description of one or more page sections, with new HTML content to reflect the change. There is a lot of code lifted verbatim from hgTables that I intend to libify when the dust settles a bit (search for "verbatim"). Things that work: group -> track -> table selection; reordering updates notion of which source is primary (needed for filters); removed sections are reset, and newly displayed sections always appear at bottom; all buttons do something, even if it's not yet useful. :) To do: query execution, position input, output format change handling, output field selection, and filters.
• src/hg/hgVarAnnogrator/makefile
  • lines changed 15, context: html, text, full: html, text
    Feature #1652 (Variant Annotation Tool): First draft of UI: mostactions trigger an ajax call that sends a JSON description of the query (and what changed); the response is a JSON description of one or more page sections, with new HTML content to reflect the change. There is a lot of code lifted verbatim from hgTables that I intend to libify when the dust settles a bit (search for "verbatim"). Things that work: group -> track -> table selection; reordering updates notion of which source is primary (needed for filters); removed sections are reset, and newly displayed sections always appear at bottom; all buttons do something, even if it's not yet useful. :) To do: query execution, position input, output format change handling, output field selection, and filters.
• src/hg/js/hgVarAnnogrator.js
  • lines changed 111, context: html, text, full: html, text
    Feature #1652 (Variant Annotation Tool): First draft of UI: mostactions trigger an ajax call that sends a JSON description of the query (and what changed); the response is a JSON description of one or more page sections, with new HTML content to reflect the change. There is a lot of code lifted verbatim from hgTables that I intend to libify when the dust settles a bit (search for "verbatim"). Things that work: group -> track -> table selection; reordering updates notion of which source is primary (needed for filters); removed sections are reset, and newly displayed sections always appear at bottom; all buttons do something, even if it's not yet useful. :) To do: query execution, position input, output format change handling, output field selection, and filters.
• src/hg/js/makefile
  • lines changed 1, context: html, text, full: html, text
    Feature #1652 (Variant Annotation Tool): First draft of UI: mostactions trigger an ajax call that sends a JSON description of the query (and what changed); the response is a JSON description of one or more page sections, with new HTML content to reflect the change. There is a lot of code lifted verbatim from hgTables that I intend to libify when the dust settles a bit (search for "verbatim"). Things that work: group -> track -> table selection; reordering updates notion of which source is primary (needed for filters); removed sections are reset, and newly displayed sections always appear at bottom; all buttons do something, even if it's not yet useful. :) To do: query execution, position input, output format change handling, output field selection, and filters.
• src/hg/lib/annoGrateWig.c
  • lines changed 2, context: html, text, full: html, text
    Removing silly debug printf caught by Brian in code review (thanks!).
• src/hg/lib/annoStreamDb.c
  • lines changed 4, context: html, text, full: html, text
    annoStreamDb: use superclass's numCols instead of own now (#6152).
• src/hg/lib/web.c
  • lines changed 3, context: html, text, full: html, text
    Feature #1652 (Variant Annotation Tool): First draft of UI: mostactions trigger an ajax call that sends a JSON description of the query (and what changed); the response is a JSON description of one or more page sections, with new HTML content to reflect the change. There is a lot of code lifted verbatim from hgTables that I intend to libify when the dust settles a bit (search for "verbatim"). Things that work: group -> track -> table selection; reordering updates notion of which source is primary (needed for filters); removed sections are reset, and newly displayed sections always appear at bottom; all buttons do something, even if it's not yet useful. :) To do: query execution, position input, output format change handling, output field selection, and filters.
• src/inc/annoFilter.h
  • lines changed 5, context: html, text, full: html, text
    Feature #6152 (Variant Annotation Tool): enhancement to filter logic:filters can be for inclusion or exclusion when the condition is met, based on the new filter->isExclude. When a filter is set to rightJoin and it is for inclusion, annoGratorIntegrate propagates rightJoin failure if no rows overlap since the condition for inclusion has not been met.
• src/inc/annoGrator.h
  • lines changed 4, context: html, text, full: html, text
    Feature #6152 (Variant Annotation Tool): enhancement to filter logic:filters can be for inclusion or exclusion when the condition is met, based on the new filter->isExclude. When a filter is set to rightJoin and it is for inclusion, annoGratorIntegrate propagates rightJoin failure if no rows overlap since the condition for inclusion has not been met.
• src/inc/annoStreamer.h
  • lines changed 4, context: html, text, full: html, text
    Feature #6152 (Variant Annotation Tool): enhancement to filter logic:filters can be for inclusion or exclusion when the condition is met, based on the new filter->isExclude. When a filter is set to rightJoin and it is for inclusion, annoGratorIntegrate propagates rightJoin failure if no rows overlap since the condition for inclusion has not been met.
• src/inc/dystring.h
  • lines changed 2, context: html, text, full: html, text
    Feature #1652 (Variant Annotation Tool): First draft of UI: mostactions trigger an ajax call that sends a JSON description of the query (and what changed); the response is a JSON description of one or more page sections, with new HTML content to reflect the change. There is a lot of code lifted verbatim from hgTables that I intend to libify when the dust settles a bit (search for "verbatim"). Things that work: group -> track -> table selection; reordering updates notion of which source is primary (needed for filters); removed sections are reset, and newly displayed sections always appear at bottom; all buttons do something, even if it's not yet useful. :) To do: query execution, position input, output format change handling, output field selection, and filters.
• src/lib/annoFilter.c
  • lines changed 30, context: html, text, full: html, text
    Feature #6152 (Variant Annotation Tool): enhancement to filter logic:filters can be for inclusion or exclusion when the condition is met, based on the new filter->isExclude. When a filter is set to rightJoin and it is for inclusion, annoGratorIntegrate propagates rightJoin failure if no rows overlap since the condition for inclusion has not been met.
• src/lib/annoGrator.c
  • lines changed 27, context: html, text, full: html, text
    Feature #6152 (Variant Annotation Tool): enhancement to filter logic:filters can be for inclusion or exclusion when the condition is met, based on the new filter->isExclude. When a filter is set to rightJoin and it is for inclusion, annoGratorIntegrate propagates rightJoin failure if no rows overlap since the condition for inclusion has not been met.