d43ec6011a8adc1ba82e3b2c2473e2043d300c03
hiram
  Thu Apr 19 14:10:07 2012 -0700
UCSC source from CVS source tree 2005 version
diff --git src/utils/cpgIslandExt/readseq.h src/utils/cpgIslandExt/readseq.h
new file mode 100644
index 0000000..18d0a45
--- /dev/null
+++ src/utils/cpgIslandExt/readseq.h
@@ -0,0 +1,9 @@
+/*  Last edited: Apr 26 14:37 1994 (rd) */
+
+extern int readSequence (FILE *fil, int *conv,
+			 char **seq, char **id, char **desc, int *length) ;
+				/* read next sequence from file */
+extern int seqConvert (char *seq, int *length, int *conv) ;
+				/* convert in place - can shorten */
+extern int dna2textConv[] ;
+extern int dna2indexConv[] ;