File Changes for fang
switch to commits view, user indexv265_base to v266_preview (2012-03-27 to 2012-04-10) v266
- src/hg/encode/DAFs/3.0/hg19/wgEncodeUncBsuProt.daf
- lines changed 23, context: html, text, full: html, text
create new views for proteomGenomics experiments for search results on genome database, genecode annotation, modified peptides, bigbed file format
- lines changed 1, context: html, text, full: html, text
change version number from 2.0 to 3.1
- lines changed 1, context: html, text, full: html, text
change dafVersion from 2.0 to 3.1
- lines changed 1, context: html, text, full: html, text
change dafVersion from 3.1 to 3.0 as the former gets an error when upload
- src/hg/makeDb/doc/encodeDccMm9/wgEncodeLicrTfbs.release2.notes
- src/hg/makeDb/trackDb/cv/alpha/cv.ra
- lines changed 36, context: html, text, full: html, text
make new views proteomGenomics experiments for search on genome database, gencode annotation, modified peptides, bigbed file
- src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeCaltechRnaSeq.ra
- lines changed 203, context: html, text, full: html, text
update with new submissions (got distracted to work on other things, this msg may not be accurate
- src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrHistone.ra
- lines changed 3121, context: html, text, full: html, text
Revert "added in new mouse tracls"
This reverts commit be633f8017ea8465308013d3db3c016cf20e73fd.
- lines changed 1249, context: html, text, full: html, text
update those subtracks submitted before ADULT8WKS was changed to ADLT8W
- lines changed 1873, context: html, text, full: html, text
change ADULT8WKS to 1ADLT8W for ordering, update mdb
- src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrTfbs.ra
- lines changed 38, context: html, text, full: html, text
try to resolve merge conflict
- src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeSydhHist.ra
- lines changed 1023, context: html, text, full: html, text
update with new submissions
- src/hg/makeDb/trackDb/mouse/mm9/trackDb.wgEncode.ra
- lines changed 2, context: html, text, full: html, text
add alpha,beta at the end of xxxLicrHistone.release2, add xxxLicrHistone.release3
- lines changed 2, context: html, text, full: html, text
add public at the end of xxxLicrHistone.release2.ra and add alpha,beta to xxxLicrHistone.release3.ra
- lines changed 2, context: html, text, full: html, text
please ignore this change if you are reviewing the code for this section, change back to original as I can't access my sandbox, but it is probably a server error, it actually works fine, I'll need to add the change back after this commit
- lines changed 2, context: html, text, full: html, text
add beta,public to the end of xxxLicrHistone.release2 and alpha to the end of xxxLicrHistone.release3
- lines changed 2, context: html, text, full: html, text
remove LicrHistone.release3, add alpha,beta,product to the end of LicrHistone.release2
- lines changed 1, context: html, text, full: html, text
add LicrHistone.release3 alpha
- lines changed 1, context: html, text, full: html, text
change the end of LicrHistone.release2 from alpha,beta,product to beta,product
- lines changed 3, context: html, text, full: html, text
added CaltechRnaSeq.release1.ra to include
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeCaltechRnaSeq.release1.html
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeCaltechRnaSeq.release1.ra
- lines changed 45, context: html, text, full: html, text
update with new submissions (got distracted to work on other things, this msg may not be accurate
- lines changed 2, context: html, text, full: html, text
trying to fix make error (note 29, ticket #4156, add rep=rep1 at the end of subGroups for Aln track of submission id 6081, 6082
- lines changed 2, context: html, text, full: html, text
removed fields with only one value from sortOrder and filedownload list
- lines changed 16, context: html, text, full: html, text
clean up short and long labels
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.html
- lines changed 14, context: html, text, full: html, text
fixes according to Steve's comments in 153, #5393
- lines changed 1, context: html, text, full: html, text
fixed Steve's comment 10, 11b, 16b in note 165 #5393
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.ra
- lines changed 44, context: html, text, full: html, text
add Histone Modifications by to the long label of new submissions, responding to Steve's pont 4 in note 152 and note 155 in #5393
- lines changed 3, context: html, text, full: html, text
fix adult-24wks to 24w to be consistent with others
- lines changed 120, context: html, text, full: html, text
remove 1 before adult8wks, as it may have broken the pull down list below the matrix
- lines changed 128, context: html, text, full: html, text
add 1 in front of ADULT8WKS and 2 to ADULT24WKS, update the dimensionAchecked as well
- lines changed 10, context: html, text, full: html, text
fixed the default check box, see Steve's point 5,6 in note 157 and Venkat note 168 in ticket 5393
- lines changed 1, context: html, text, full: html, text
fixing the greying box problem, see note 169, 173 in #5393
- lines changed 2, context: html, text, full: html, text
turn whole brain E14.5 off to fix the grey box problem but the lab wants to have whole brain E14.5 displayed by default, this is in conflict
- lines changed 1, context: html, text, full: html, text
turn off the whole brain E14.5 subtrack, missekd earlier
- lines changed 362, context: html, text, full: html, text
Revert "added in enw tracks for licr histone"
This reverts commit dcff6d1eccd504083b3c1194c50f1ac5ebb3ca2f.
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release3.html
- lines changed 242, context: html, text, full: html, text
change ADULT8WKS to ADLT8W in all the subtracks, add new html file
- lines changed 1, context: html, text, full: html, text
change release note 2 to 3, a test
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release3.ra
- lines changed 1756, context: html, text, full: html, text
change ADULT8WKS to ADLT8W in all the subtracks, add new html file
- lines changed 428, context: html, text, full: html, text
change age=ADLT8W to age=ADULT8WKS to update those submissions loaded before ADULT8WKS is changed to ADLT8W
- lines changed 36, context: html, text, full: html, text
change ADULT8WKS to ADLT8W after update mdb of all the subtracks submitted before ADULT8WKS was changed to ADLT8W
- lines changed 147, context: html, text, full: html, text
change ADULT8WKS to 1ADLT8W for ordering, update mdb
- lines changed 1, context: html, text, full: html, text
change wrangler from Venkat to Ruihua in comment section
- lines changed 5, context: html, text, full: html, text
add 0 in front of BCELLxxx to force order
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.html
- lines changed 23, context: html, text, full: html, text
copy the html from LicrHistone which is the same as this track after correction in responding to all the points in Steve's note 153, points 11b, 16b in note 165 in ticket #5393
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrTfbs.release2.ra
- lines changed 77, context: html, text, full: html, text
fixing cell name, age order, see Steve's point 1, 3 in note 152, ticket #5393 which are the same as this track
- lines changed 10, context: html, text, full: html, text
add TFBS to MEL, BMDM longLabel
- lines changed 1, context: html, text, full: html, text
fixing the greying box problem, see note 169, 173 in #5393
- lines changed 4, context: html, text, full: html, text
turn whole brain E14.5 off to fix the grey box problem but the lab wants to have whole brain E14.5 displayed by default, this is in conflict
- lines changed 9, context: html, text, full: html, text
remove stanza of Placenta adult-8wks Input, as its corresponding tfbs antibody dataset were not submitted
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeSydhHist.release2.html
- lines changed 147, context: html, text, full: html, text
create trackDb and html files for release2
- lines changed 6, context: html, text, full: html, text
update html reference and release note
- src/hg/makeDb/trackDb/mouse/mm9/wgEncodeSydhHist.release2.ra
- lines changed 163, context: html, text, full: html, text
create trackDb and html files for release2
- lines changed 1, context: html, text, full: html, text
update html reference and release note
- lines changed 137, context: html, text, full: html, text
update with new submissions
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