Commits for wong

v265_base to v266_preview (2012-03-27 to 2012-04-10) v266

• added in changes from lab
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeDukeAffyExon.release3.html - lines changed 30, context: html, text, full: html, text
• added insertLength to the or None pile
  • src/hg/encode/encodeValidate/doEncodeValidate.pl - lines changed 1, context: html, text, full: html, text
• revoked data and added in replacement files
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCaltechRnaSeq.ra - lines changed 1476, context: html, text, full: html, text
• removed bad signals from caltech rnaseq
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCaltechRnaSeq.release2.ra - lines changed 549, context: html, text, full: html, text
• added in replacement tracks for caltech rna seq
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCaltechRnaSeq.release2.ra - lines changed 524, context: html, text, full: html, text
• added in new metadata for UwDnase tracks
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwDnase.ra - lines changed 2551, context: html, text, full: html, text
• copying over wgEncodeUwDnase to release5 trackDb
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release5.ra - lines changed 4562, context: html, text, full: html, text
• notes for caltech rna seq
  • src/hg/makeDb/doc/encodeDccHg19/wgEncodeCaltechRnaSeq.release2.notes - lines changed 566, context: html, text, full: html, text
• adding in dummy as and sql files for bigBed
  • src/hg/lib/bigBed.as - lines changed 10, context: html, text, full: html, text
  • src/hg/lib/bigBed.sql - lines changed 17, context: html, text, full: html, text
• reverting to 5a655dd525b84371e1e9c3326f741ce23e3e378a because it was really release 3
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCaltechRnaSeq.release2.ra - lines changed 1033, context: html, text, full: html, text
• adding in new caltech rnaSeq release3.ra
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCaltechRnaSeq.release3.ra - lines changed 2050, context: html, text, full: html, text
• reverting to b9fbbd2f2d1db6c0a26c06712148113494b962bc for release 2 notes
  • src/hg/makeDb/doc/encodeDccHg19/wgEncodeCaltechRnaSeq.release2.notes - lines changed 566, context: html, text, full: html, text
• release notes for caltech release 3
  • src/hg/makeDb/doc/encodeDccHg19/wgEncodeCaltechRnaSeq.release3.notes - lines changed 1393, context: html, text, full: html, text
• removed daf version check
  • src/hg/utils/automation/Encode.pm - lines changed 8, context: html, text, full: html, text
• added in new tracks to trackDb
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release5.ra - lines changed 738, context: html, text, full: html, text
• missing 1 md5sum
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromDnase.ra - lines changed 2, context: html, text, full: html, text
• bypassing patch.ra for replicate fix, and just going forward with release 5.
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 1, context: html, text, full: html, text
• removing patch.ra, using release5.ra instead
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.patch.ra - lines changed 4562, context: html, text, full: html, text
• fixed md5sums after another resubmit of all the data
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeDukeAffyExon.ra - lines changed 153, context: html, text, full: html, text
• more html chagnes by lab
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeDukeAffyExon.release3.html - lines changed 11, context: html, text, full: html, text
• forgot to close ul tag
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeDukeAffyExon.release3.html - lines changed 1, context: html, text, full: html, text
• added in emtadata for uwhistone new tracks
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwHistone.ra - lines changed 1221, context: html, text, full: html, text
• adding in release4.ra for uwhistone
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwHistone.release4.ra - lines changed 5953, context: html, text, full: html, text
• added in metadata for new cshl short tracks
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlShortRnaSeq.ra - lines changed 2588, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeRikenCage.ra - lines changed 1470, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwHistone.release4.ra - lines changed 301, context: html, text, full: html, text
• added in new trackDb tracks for cshl short contigs and whatnot
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.release3.ra - lines changed 1424, context: html, text, full: html, text
• didn't notice monocytes in the tier 3 cell lines, corrected
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.release3.ra - lines changed 3, context: html, text, full: html, text
• qa fixes
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeDukeAffyExon.release3.html - lines changed 27, context: html, text, full: html, text
• adding in metadata for gisrnaper
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeGisRnaPet.ra - lines changed 3082, context: html, text, full: html, text
• added in references to duke affy exon
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeDukeAffyExon.release3.html - lines changed 35, context: html, text, full: html, text
• changed matrix around
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwHistone.release4.ra - lines changed 4, context: html, text, full: html, text
• added in new tracks from gis
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeGisRnaPet.release2.ra - lines changed 2598, context: html, text, full: html, text
• added in more uw dnase tracks
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwDnase.ra - lines changed 409, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release5.ra - lines changed 109, context: html, text, full: html, text
• added in new mouse metaDb for sydh tfbs
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeSydhTfbs.ra - lines changed 1172, context: html, text, full: html, text
• added in tracks to sydh tfbs mm9 trackDb
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeSydhTfbs.release3.ra - lines changed 146, context: html, text, full: html, text
• split off release4 trackDb ra for uwDgf
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.ra - lines changed 1488, context: html, text, full: html, text
• added in new tracks for uw dgf
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwDgf.ra - lines changed 1179, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.ra - lines changed 567, context: html, text, full: html, text
• corrected some syntax errors, and changed conditional on bedRnaElements to allow a dot in the 8th field
  • src/hg/encode/encodeValidate/doEncodeValidate.pl - lines changed 5, context: html, text, full: html, text
• added in new tracks for cshl short
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlShortRnaSeq.ra - lines changed 852, context: html, text, full: html, text
• added in metadata for new riken cage tracks
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeRikenCage.ra - lines changed 5044, context: html, text, full: html, text
• added in tracks to riken cage release3 for freeze
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeRikenCage.release3.ra - lines changed 3173, context: html, text, full: html, text
• flippign the matrix around, because ther'es too many cell lines now
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeRikenCage.release3.ra - lines changed 1, context: html, text, full: html, text
• data came in with incorrect metadata, correcting
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwDgf.ra - lines changed 181, context: html, text, full: html, text
• added in conditional to always use the sex from ddf regardless of if it's a tissue or not
  • src/hg/encode/encodeValidate/doEncodeValidate.pl - lines changed 6, context: html, text, full: html, text
• added in riken cage metaData part 2
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeRikenCage.ra - lines changed 446, context: html, text, full: html, text
• last time there was a replacement file that didn't get the v4
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeRikenCage.ra - lines changed 39, context: html, text, full: html, text
• added in new riken release 3 tracks part 2
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeRikenCage.release3.ra - lines changed 158, context: html, text, full: html, text
• incorrect assembly in daf for mouse
  • src/hg/encode/DAFs/3.0/mm9/wgEncodeFsuRepliSeq.daf - lines changed 1, context: html, text, full: html, text
• added in new broad histone metaDb
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeBroadHistone.ra - lines changed 2676, context: html, text, full: html, text
• Errors in metaDb, not all submissions have an antibodyRevert "added in new broad histone metaDb" This reverts commit 6b7478127796dadd417430b7c59ab17af25b3692.
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeBroadHistone.ra - lines changed 2676, context: html, text, full: html, text
• added in more cshl long tracks
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra - lines changed 357, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.release2.ra - lines changed 33, context: html, text, full: html, text
• addingin FSU mouse tiling platform
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 8, context: html, text, full: html, text
• description and type got merged for DBA/2
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 3, context: html, text, full: html, text
• added in new mouse tracls
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrHistone.ra - lines changed 3121, context: html, text, full: html, text
• added in enw tracks for licr histone
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release2.ra - lines changed 362, context: html, text, full: html, text
• adding in new tracks for broad histone metaDb
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeBroadHistone.ra - lines changed 2676, context: html, text, full: html, text
• adding in broad histone trackDb tracks
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeBroadHistone.release3.ra - lines changed 674, context: html, text, full: html, text
• qa fixes
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeDukeAffyExon.release3.ra - lines changed 1021, context: html, text, full: html, text
• added in and corrected some labels
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 4, context: html, text, full: html, text
• correcting capitalization error
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 1, context: html, text, full: html, text
• more labels
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 1, context: html, text, full: html, text
• more qa fixes to labels
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeDukeAffyExon.release3.ra - lines changed 5, context: html, text, full: html, text
• found more errors
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeDukeAffyExon.release3.ra - lines changed 15, context: html, text, full: html, text
• qa fixes, and more labels in cv fun
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeDukeAffyExon.release3.html - lines changed 5, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeDukeAffyExon.release3.ra - lines changed 3, context: html, text, full: html, text
• more label changes for qa
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 3, context: html, text, full: html, text
• adding in dcc Accessions
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeDukeAffyExon.ra - lines changed 91, context: html, text, full: html, text
• new long labels for uw dnase
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release5.ra - lines changed 101, context: html, text, full: html, text
• short labels for uwDnase
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release5.ra - lines changed 510, context: html, text, full: html, text
• changed wi30O to wi38, same thing, treatment was embedded in cell name
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release5.ra - lines changed 7, context: html, text, full: html, text
• copying over release 4 html to 5
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release5.html - lines changed 132, context: html, text, full: html, text
• removed fdr 1%, as everything is fdr 1%
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release5.ra - lines changed 182, context: html, text, full: html, text
• changing to release 5
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release5.html - lines changed 2, context: html, text, full: html, text
• added in md5sums
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwDnase.ra - lines changed 146, context: html, text, full: html, text
• notes for uw dnase release 5
  • src/hg/makeDb/doc/encodeDccHg19/wgEncodeUwDnase.release5.notes - lines changed 2201, context: html, text, full: html, text
• added in dummy column
  • src/hg/lib/bigBed.sql - lines changed 1, context: html, text, full: html, text
• revoked old dataset, missed becuase the histone tag changed between releases h3k4 vs h3k04
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwHistone.ra - lines changed 11, context: html, text, full: html, text
• added in md5sums
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwHistone.ra - lines changed 51, context: html, text, full: html, text
• incorrectly revoked, turns out the repleacement was missing the treatment in the name
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwHistone.ra - lines changed 11, context: html, text, full: html, text
• some minor updates, changed how html is outputted, and all authors are used for alphabetizaio instead of just first
  • src/hg/encode/qaAddTrackReferences/qaAddTrackReferences - lines changed 10, context: html, text, full: html, text
• revoked objects that were missing treatment names, resubmitting
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwHistone.ra - lines changed 11, context: html, text, full: html, text
• revoked old tracks, added in replacement tracks
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwHistone.release4.ra - lines changed 102, context: html, text, full: html, text
• reworked long labels
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwHistone.release4.ra - lines changed 144, context: html, text, full: html, text
• added in replacement tracks
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwHistone.ra - lines changed 255, context: html, text, full: html, text
• putting an experiment without a rep2 into the attic, lab doesn't think it'll ever get rep2
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwHistone.ra - lines changed 4, context: html, text, full: html, text
• added in controls as accessions, we dont' have all of them yet
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwHistone.ra - lines changed 143, context: html, text, full: html, text
• cleaned up the pubmed central path a bit
  • src/hg/encode/qaAddTrackReferences/qaAddTrackReferences - lines changed 26, context: html, text, full: html, text
• adding in known accessions and expids
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwHistone.ra - lines changed 21, context: html, text, full: html, text
• removing bigBed.as file
  • src/hg/lib/bigBed.as - lines changed 10, context: html, text, full: html, text
  • src/hg/lib/bigBed.sql - lines changed 18, context: html, text, full: html, text
• removed old bigBedTypes support (tagalign stuff), makes Tim's life easier
  • src/hg/encode/encodeLoad/installSqlSchemas.pl - lines changed 23, context: html, text, full: html, text
  • src/hg/utils/automation/Encode.pm - lines changed 1, context: html, text, full: html, text
• added in more controlIds
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwHistone.ra - lines changed 51, context: html, text, full: html, text
• long labels for uw dgf
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.ra - lines changed 40, context: html, text, full: html, text
• added in md5sums
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwDgf.ra - lines changed 61, context: html, text, full: html, text
• added in treatment to the cv list
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.ra - lines changed 1, context: html, text, full: html, text
• fixed short labels
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.ra - lines changed 22, context: html, text, full: html, text
• adding in notes for histone and dgf
  • src/hg/makeDb/doc/encodeDccHg19/wgEncodeUwDgf.release4.notes - lines changed 739, context: html, text, full: html, text
  • src/hg/makeDb/doc/encodeDccHg19/wgEncodeUwHistone.release4.notes - lines changed 2492, context: html, text, full: html, text
• added in accessions and expids
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUwHistone.ra - lines changed 101, context: html, text, full: html, text
• changed hash bangs over to new styles
  • src/hg/encode/encodeMkChangeNotes/encodeMkChangeNotes - lines changed 1, context: html, text, full: html, text
  • src/hg/encode/encodeQaCheckHgdownloadFiles/encodeQaCheckHgdownloadFiles - lines changed 1, context: html, text, full: html, text
  • src/hg/encode/encodeQaInit/encodeQaInit - lines changed 1, context: html, text, full: html, text
  • src/hg/encode/qaAddTrackReferences/qaAddTrackReferences - lines changed 1, context: html, text, full: html, text
  • src/hg/encode/qaUpdateMetadata/qaUpdateMetadata - lines changed 1, context: html, text, full: html, text
  • src/hg/encode/raDiff/raDiff - lines changed 1, context: html, text, full: html, text
  • src/hg/encode/raMerge/raMerge - lines changed 1, context: html, text, full: html, text
• changed variable name to be more descriptive, changed errors to print to stderr
  • src/hg/encode/qaAddTrackReferences/qaAddTrackReferences - lines changed 6, context: html, text, full: html, text
• changed hashbang to new standard
  • src/hg/encode/qaEncodeTracks2/qaEncodeTracks2 - lines changed 1, context: html, text, full: html, text
• added in release notes and new html for uw histone
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwHistone.release4.html - lines changed 96, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwHistone.release4.ra - lines changed 1, context: html, text, full: html, text
• added in release notes and new html for uw dgf
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.html - lines changed 167, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.ra - lines changed 1, context: html, text, full: html, text
• reworked long and short labels from previous release, also cleamed out commented lines
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCaltechRnaSeq.release3.ra - lines changed 674, context: html, text, full: html, text
• reded short labels
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwHistone.release4.ra - lines changed 37, context: html, text, full: html, text
• added expIds and accessiosn to caltech rnaseq
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCaltechRnaSeq.ra - lines changed 121, context: html, text, full: html, text
• filling in the treatment = none holes
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCaltechRnaSeq.ra - lines changed 549, context: html, text, full: html, text
• filling in holes for insert length (doesn't exist for non paired reads)
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCaltechRnaSeq.ra - lines changed 118, context: html, text, full: html, text
• correcting date submitted and unrestricted
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCaltechRnaSeq.ra - lines changed 181, context: html, text, full: html, text
• added in new open chrom chip tracks
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromChip.ra - lines changed 877, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.release2.ra - lines changed 145, context: html, text, full: html, text
• added in md5sums
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromChip.ra - lines changed 43, context: html, text, full: html, text
• removed md5sum from filesort order
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCaltechRnaSeq.release3.ra - lines changed 1, context: html, text, full: html, text
• filled in holes for localization and rnaExtract
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCaltechRnaSeq.ra - lines changed 171, context: html, text, full: html, text
• converted controlIds to dccaccession
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeOpenChromChip.ra - lines changed 290, context: html, text, full: html, text
• changed description at lab's behest
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 1, context: html, text, full: html, text
• updated notes files for open chrom chip
  • src/hg/makeDb/doc/encodeDccHg19/wgEncodeOpenChromChip.release2.notes - lines changed 122, context: html, text, full: html, text
• reworked short labels
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.release2.ra - lines changed 51, context: html, text, full: html, text
• reworked short and long labels that were too long, and made all chagnes consistent
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.release2.ra - lines changed 66, context: html, text, full: html, text
• staging the expIds for 3 tracks to beta for a metadata update
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeOpenChromChip.ra - lines changed 272, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeOpenChromFaire.ra - lines changed 180, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeSunyAlbanyTiling.ra - lines changed 9, context: html, text, full: html, text
• added in metadata that i forgot to
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra - lines changed 357, context: html, text, full: html, text
• re-added in tracks for cshl long rna-seq lost in the merge
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.release2.ra - lines changed 33, context: html, text, full: html, text
• added in md5sums for cshl long rna seq
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra - lines changed 391, context: html, text, full: html, text
• cleaned up trackDb in cshl long
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.release2.ra - lines changed 157, context: html, text, full: html, text
• adding notes foir cshl long release 2
  • src/hg/makeDb/doc/encodeDccHg19/wgEncodeCshlLongRnaSeq.release2.notes - lines changed 3739, context: html, text, full: html, text
• fixed autogenerated long labels
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.release2.ra - lines changed 94, context: html, text, full: html, text