c72b4b4412c574336911c4eb7135a9677c2773ef
braney
  Wed Apr 25 14:07:45 2012 -0700
ongoing #6152.   Added support for variants longer than 1 in CDS.
diff --git src/hg/inc/soterm.h src/hg/inc/soterm.h
index 4776bf9..c436a37 100644
--- src/hg/inc/soterm.h
+++ src/hg/inc/soterm.h
@@ -33,30 +33,32 @@
     non_coding_exon_variant=1792,
     non_synonymous_variant=1818,
     synonymous_variant=1819,
     } soTerm;
 
 struct soCall  // a single variant effect call
     {
     struct soCall *next;
     uint    soNumber;           // Sequence Ontology Number
     union
 	{
 	struct codingChange     // (non)synonymous variant
 	    {
 	    char *transcript;
 	    uint exonNumber;
+
+	    // the next three should have a length specified too
 	    uint cDnaPosition;
 	    uint cdsPosition;
 	    uint pepPosition;
 	    char *aaChanges;
 	    char *codonChanges;
 	    } codingChange;
 	struct     // intron_variant
 	    {
 	    char *transcript;
 	    uint intronNumber;
 	    } intron;
 	struct    // a generic variant
 	    {
 	    char    *soOther0;           // Ancillary detail 0
 	    char    *soOther1;           // Ancillary detail 1