Commits for wong

v267_preview to v267_preview2 (2012-05-01 to 2012-05-08) v267

• fixed stuff at qa requests
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeRikenCage.release3.html - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeRikenCage.release3.ra - lines changed 11, context: html, text, full: html, text
• long labels for sydh tfbs
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeSydhTfbs.release2.ra - lines changed 722, context: html, text, full: html, text
• fixed short labels for sydh tfbs
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeSydhTfbs.release2.ra - lines changed 171, context: html, text, full: html, text
• forgot to remove the explicit path to galts bin and change to cluster one
  • src/hg/encode/encodeLoad/doEncodeLoad.pl - lines changed 1, context: html, text, full: html, text
• added in expIds and accessions
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra - lines changed 1039, context: html, text, full: html, text
• updating reference
  • python/lib/ucscgenomics/mkChangeNotes.py - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.release2.html - lines changed 7, context: html, text, full: html, text
• added in new metadata for cshl long
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra - lines changed 1285, context: html, text, full: html, text
• added in expIds and dcc accessions
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra - lines changed 85, context: html, text, full: html, text
• adding in patch release for label change
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibRnaSeq.patch.ra - lines changed 870, context: html, text, full: html, text
• moved signal over to raw signal
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibRnaSeq.patch.ra - lines changed 45, context: html, text, full: html, text
• added sql line to gisRnaPet daf
  • src/hg/encode/DAFs/3.0/hg19/wgEncodeGisRnaPet.daf - lines changed 1, context: html, text, full: html, text
• removing gunked comment lines
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.release3.ra - lines changed 623, context: html, text, full: html, text
• removing double newlines
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.release3.ra - lines changed 578, context: html, text, full: html, text
• removing experiment meant for attic
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.release3.ra - lines changed 8, context: html, text, full: html, text
• redoing last 2 commits on this file correctly
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.release3.ra - lines changed 487, context: html, text, full: html, text
• added in new cshl short tracks
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlShortRnaSeq.ra - lines changed 883, context: html, text, full: html, text
• added in enw tracks
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.release3.ra - lines changed 138, context: html, text, full: html, text
• renamed tracks, and added in some new stanzas
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra - lines changed 478, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.release2.ra - lines changed 56, context: html, text, full: html, text
• renaming more stuff to make donor cell lines consistent
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra - lines changed 506, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.release2.ra - lines changed 18, context: html, text, full: html, text
• last of the renamed for donor cell lines
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra - lines changed 429, context: html, text, full: html, text
• forgot to add trackDb
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.release2.ra - lines changed 32, context: html, text, full: html, text
• fixing for new tree structure
  • src/hg/encode/encodeQaInit/encodeQaInit - lines changed 2, context: html, text, full: html, text
• added in known expIds and accessions
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra - lines changed 71, context: html, text, full: html, text
• changed labels to reflect that things are raw signals
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.release3.ra - lines changed 307, context: html, text, full: html, text
• added md5sums
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra - lines changed 52, context: html, text, full: html, text
• added in new notes and html changers for cshl long
  • src/hg/makeDb/doc/encodeDccHg19/wgEncodeCshlLongRnaSeq.release2.notes - lines changed 333, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.release2.html - lines changed 2, context: html, text, full: html, text