6ccc7be0e12f7d98db4f3b733d4c5cf7442d2b2d
luvina
  Wed May 16 11:53:05 2012 -0700
made a correction to hetGla1 announcement
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index 8c2025a..cd27a97 100644
--- src/hg/htdocs/indexNews.html
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                          <font size="4"><a name="TOC"></a><b>&nbsp; News</b></font><a href="http://www.twitter.com/GenomeBrowser" target="_blank"><img src="http://twitter-badges.s3.amazonaws.com/t_small-a.png" alt="Follow GenomeBrowser on Twitter" style="vertical-align:text-bottom; margin-left: 15px;"></a></TD>
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                   <P>
                   To receive announcements of new genome 
                   assembly releases, new software features, updates and 
                   training seminars by email, subscribe to the
                   <A HREF="https://lists.soe.ucsc.edu/mailman/listinfo/genome-announce" 
                   TARGET=_blank>genome-announce</A> mailing list.</P>
 
             
             <!-- start news -->
                 
         <font face="courier" size="3"><b>
         15 May 2012 - New Fugu (fr3) Assembly Now Available in the Genome Browser
         </b></font>
         
         <p>We are pleased to announce the release of a Genome Browser 
 		for the October 2011 fugu, <i>Takifugu rubripes</i>
 		(JGI v5.0, UCSC version fr3). Whole genome shotgun assembly was provided by the
         <a target="_blank" href="http://www.fugu-sg.org/">International Fugu Genome Sequencing 
         Consortium,</a> led by JGI and the <a target="_blank" href="http://www.imcb.a-star.edu.sg/">
         Singapore Institute of Molecular and Cell Biology</a> (IMCB).</p> 
 		
 		<p>Bulk downloads of the sequence and annotation data are available via the Genome Browser 
 		<a href="ftp://hgdownload.cse.ucsc.edu/goldenPath/fr3/">FTP server</a> or the 
 		<a href="http://hgdownload.cse.ucsc.edu/downloads.html#fugu">Downloads</a> page. 
 		These data have <a href="../goldenPath/credits.html#fugu_credits">specific conditions 
 		for use</a>. The fugu (fr3) browser annotation tracks were generated by UCSC and 
 		collaborators worldwide. See the <a href="../goldenPath/credits.html#fugu_credits" 
 		>Credits</a> page for a detailed list of the organizations and individuals who contributed 
 		to the success of this release.</p>
 
         <hr>
 
                 <FONT FACE="courier" SIZE="3"><B>15 May 2012 - Naked Mole-Rat
 		Assembly Now Available in the Genome Browser </B></FONT>
                 <P>We are pleased to announce the release of a Genome Browser 
 		for the July 2011 naked mole-rat, <i>Heterocephalus glaber</i>
 		(BGI version HetGla1.0, UCSC version hetGla1). This draft assembly,  
 		produced by the 
 		<A HREF="http://en.genomics.cn/" 
 		TARGET=_blank>Beijing Genomics Institute</A>, has been sequenced using
 		Illumina reads with a sequencing depth of >20x. There are 
 		39,266 scaffolds with a total size of 2,643,961,837 bases. 
-		The N50 size of the scaffolds is 1,321,980,918 bases with 502 
+		The N50 size of the scaffolds is 1,603,177 bases with 502 
 		scaffolds larger, and 38,764 scaffolds smaller. The mitochondrial 
 		sequence is also available as the virtual chromosome "chrM".
 		<P>
 		Bulk downloads of the sequence and annotation data are available 
 		via the Genome Browser 
 		<A HREF="ftp://hgdownload.cse.ucsc.edu/goldenPath/hetGla1/">FTP server</A> or the 
 		<A HREF="http://hgdownload.cse.ucsc.edu/downloads.html#naked_mole-rat" 
 		TARGET=_blank>Downloads</A> page. These data have 
 		<A HREF="../goldenPath/credits.html#naked_mole-rat_use" 
 		>specific conditions for use</A>. The naked mole-rat browser 
 		annotation tracks were generated by UCSC and collaborators worldwide. 
 		See the 
 		<A HREF="../goldenPath/credits.html#naked_mole-rat_credits" 
 		>Credits</A> page for a detailed list of the organizations and 
 		individuals who contributed to the success of this release. 
                 <HR>
 
 		<FONT FACE="courier" SIZE="3"><B>8 May 2012 - OpenHelix
                 to Conduct Free Genome Browser Webinars in May</B></FONT>
                 <P>
                 <A HREF="http://www.openhelix.com" TARGET=_blank>OpenHelix</A> 
 		is conducting two free webinars on the UCSC Genome Browser:
                 <UL>
                 <LI><A HREF="http://www.openhelix.com/cgi/webinarInfo.cgi?id=43"
 		TARGET=_blank>UCSC Genome Browser: An Introduction</A> 
 		(Thursday, May 17, 1pm EDT) -- designed for new users
                 of the UCSC Genome Browser and those who want to improve their 
                 skills at basic navigation and display.
                 <LI><A HREF="http://www.openhelix.com/cgi/webinarInfo.cgi?id=44"
 		TARGET=_blank>UCSC Table Browser and Custom Tracks</A>
 		(Thursday, May 24, at 1pm EDT) -- advanced Genome Browser 
 		topics, including creating Custom Tracks and using the Table 
 		Browser.
                 </UL>
                 <P>
                 The webinars will last approximately 1hr 15min.
                 <P>
                 Seating is limited and                 
 		<A HREF="http://www.openhelix.com/cgi/webinar.cgi"
                 TARGET=_blank>registration is required</A>. Slides may be 
                 downloaded from the <A HREF="http://www.openhelix.com/ucsc"
                 TARGET=_blank>OpenHelix website</A> prior to the webinar.
                 <P>
                 OpenHelix provides training materials and programs on hundreds 
 		of free, publicly accessible bioinformatics and genomics 
 		resources. To browse their entire collection of UCSC genomics 
 		tutorials, go to the OpenHelix 
 		<A HREF="http://www.openhelix.com/ucsc" TARGET=_blank>UCSC 
 		training page</A>.
                 <P>
                 <HR>
             
 		
 
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 		<FONT FACE="courier" SIZE="3"><B>2 May 2012 - OpenHelix
                 Releases Updated Genome Browser Tutorials: </B></FONT>
 		<A HREF="http://www.openhelix.com" TARGET=_blank>OpenHelix</A>
                 has released updated versions of two Genome Browser tutorial
                 suites.
 		<A HREF="goldenPath/newsarch.html#050212">Read more</A>.
 		<P>
                 <FONT FACE="courier" SIZE="3"><B>18 April 2012 - GRC Planning Phase 
 		for GRCh38 Human Reference Assembly: </B></FONT>
 		The <A HREF="http://www.ncbi.nlm.nih.gov/projects/genome/assembly/grc/"
 		TARGET=_blank>Genome Reference Consortium</A> (GRC) plans to
 		update the human reference assembly to GRCh38 in the summer of 
 		2013. 
                 <A HREF="goldenPath/newsarch.html#041812">Read more</A>.
 		<P>
 ==> <a href="goldenPath/newsarch.html">News Archives</a>
 
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