File Changes for wong

v267_base to v268_preview (2012-05-15 to 2012-05-22) v268

• python/lib/ucscGb/encode/mkChangeNotes.py
  • lines changed 2, context: html, text, full: html, text
    fixing for source tree restructure
• src/hg/encode/DAFs/3.0/hg19/wgEncodeCshlLongRnaSeq.daf
  • lines changed 2, context: html, text, full: html, text
    removing raw from view name
• src/hg/encode/encodeMkChangeNotes/encodeMkChangeNotes
  • lines changed 1, context: html, text, full: html, text
    fixing for source tree restructure
• src/hg/encode/encodeQaInit/encodeQaInit
  • lines changed 4, context: html, text, full: html, text
    fixing for source tree restructure
• src/hg/encode/raDiff/raDiff
  • lines changed 1, context: html, text, full: html, text
    changed over to new library
  • lines changed 5, context: html, text, full: html, text
    fixing for source tree restructure
• src/hg/encode/raMerge/raMerge
  • lines changed 3, context: html, text, full: html, text
    fixing for source tree restructure
• src/hg/makeDb/trackDb/cv/alpha/cv.ra
  • lines changed 1, context: html, text, full: html, text
    fixed transcript genc v7 -> v10 tag error
  • lines changed 14, context: html, text, full: html, text
    adding in views plussig and minussig
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlLongRnaSeq.ra
  • lines changed 217, context: html, text, full: html, text
    fixed last donorId merge issue.
  • lines changed 96, context: html, text, full: html, text
    missing one in name only, and forgot ot add trackDb last time
  • lines changed 223, context: html, text, full: html, text
    changing all polyA pluses to dateunrestricted = 2012-05-14 if it was 05-16 or after
  • lines changed 5, context: html, text, full: html, text
    added in missing attic statements
  • lines changed 775, context: html, text, full: html, text
    correcting the plus/minus raw signals to no raw
  • lines changed 17, context: html, text, full: html, text
    more last second fixes. (attic items, label stuff)
  • lines changed 45, context: html, text, full: html, text
    added in last expIds and some objType corrections
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlShortRnaSeq.ra
  • lines changed 926, context: html, text, full: html, text
    lots of metaDb updates, almost all script generated
  • lines changed 103, context: html, text, full: html, text
    renamed monocytes and corrected metadata to not have donor id anymore. also removed some attic tracks from the trackDb
• src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.release2.html
  • lines changed 37, context: html, text, full: html, text
    more last second fixes. (attic items, label stuff)
  • lines changed 2, context: html, text, full: html, text
    last second label and trackDb and html fixes before qa
• src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlLongRnaSeq.release2.ra
  • lines changed 18, context: html, text, full: html, text
    missing one in name only, and forgot ot add trackDb last time
  • lines changed 154, context: html, text, full: html, text
    took off non -needed defaults
  • lines changed 41, context: html, text, full: html, text
    more defaults and fixed some trackDb view settings
  • lines changed 505, context: html, text, full: html, text
    fixed long labels
  • lines changed 505, context: html, text, full: html, text
    error in scriptRevert "fixed long labels"
    
    This reverts commit 096150cca51933453918b37f6ae17981950905a3.
    
  • lines changed 1, context: html, text, full: html, text
    fixed a label error
  • lines changed 693, context: html, text, full: html, text
    fixed labels
  • lines changed 373, context: html, text, full: html, text
    corrected labels for raw sig to sig
  • lines changed 271, context: html, text, full: html, text
    more last second fixes. (attic items, label stuff)
  • lines changed 613, context: html, text, full: html, text
    short labels
  • lines changed 135, context: html, text, full: html, text
    short labels part deux
  • lines changed 867, context: html, text, full: html, text
    last second label and trackDb and html fixes before qa
• src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.release3.ra
  • lines changed 789, context: html, text, full: html, text
    lots of structural changes to trackDb to make it work, and corrected tag errors
  • lines changed 0, context: html, text, full: html, text
    getting rid of uneeded whitespace
  • lines changed 130, context: html, text, full: html, text
    renamed monocytes and corrected metadata to not have donor id anymore. also removed some attic tracks from the trackDb