File Changes for cricket

v269_preview to v269_preview2 (2012-06-12 to 2012-06-19) v269

• src/hg/makeDb/doc/encodeDccHg19/wgEncodeGencodeV11.release1.notes
  • lines changed 10, context: html, text, full: html, text
    Adding the Other files
• src/hg/makeDb/doc/encodeDccHg19/wgEncodeGencodeV12.release1.notes
  • lines changed 82, context: html, text, full: html, text
    Adding notes file
• src/hg/makeDb/doc/encodeDccHg19/wgEncodeGisRnaPet.release2.notes
  • lines changed 783, context: html, text, full: html, text
    First draft of notes file
• src/hg/makeDb/schema/all.joiner
  • lines changed 80, context: html, text, full: html, text
    adding in Gencode V12
• src/hg/makeDb/trackDb/cv/alpha/cv.ra
  • lines changed 1, context: html, text, full: html, text
    I have no idea waht displayName is or why is was there
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/makefile
  • lines changed 1, context: html, text, full: html, text
    adding in Gencode V12
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeCshlShortRnaSeq.ra
  • lines changed 13, context: html, text, full: html, text
    Changing the date format
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeGencodeV12.ra
  • lines changed 278, context: html, text, full: html, text
    adding in Gencode V12
  • lines changed 18, context: html, text, full: html, text
    Adding md5sums
• src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeGisRnaPet.ra
  • lines changed 631, context: html, text, full: html, text
    Adding missing data, long and short labels, removing commented out tracks, sorting out V2's, changing to filter composites
  • lines changed 24, context: html, text, full: html, text
    Trying to work out the issue with GM12878 Cytosol. See ticket 5942
• src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra
  • lines changed 7, context: html, text, full: html, text
    Cleaning up the release2 for MarkD
• src/hg/makeDb/trackDb/human/hg19/wgEncodeCshlShortRnaSeq.release3.ra
  • lines changed 514, context: html, text, full: html, text
    Long labels
  • lines changed 2, context: html, text, full: html, text
    Lost two lines, restoring them
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeSuper.html
  • lines changed 3, context: html, text, full: html, text
    Updating to explain the most recent release
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV10.ra
  • lines changed 1, context: html, text, full: html, text
    Cleaning up the release2 for MarkD
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV10.release2.ra
  • lines changed 224, context: html, text, full: html, text
    Cleaning up the release2 for MarkD
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV11.ra
  • lines changed 19, context: html, text, full: html, text
    Cleaning up the release2 for MarkD
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV11.release2.ra
  • lines changed 224, context: html, text, full: html, text
    Cleaning up the release2 for MarkD
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV7.ra
  • lines changed 7, context: html, text, full: html, text
    Cleaning up the release2 for MarkD
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGencodeV7.release2.ra
  • lines changed 189, context: html, text, full: html, text
    Cleaning up the release2 for MarkD
• src/hg/makeDb/trackDb/human/hg19/wgEncodeGisRnaPet.release2.ra
  • lines changed 2565, context: html, text, full: html, text
    Adding missing data, long and short labels, removing commented out tracks, sorting out V2's, changing to filter composites
  • lines changed 119, context: html, text, full: html, text
    Trying to work out the issue with GM12878 Cytosol. See ticket 5942
  • lines changed 38, context: html, text, full: html, text
    Trying to work out the bedRnaElements
• src/hg/makeDb/trackDb/mouse/mm9/mapability.ra
  • lines changed 50, context: html, text, full: html, text
    Pulling mapability into a file so that you can track the alpha,beta,public progress
• src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeMapability.ra
  • lines changed 21, context: html, text, full: html, text
    Adding accesions and putting uniqueness as a labVersion
• src/hg/makeDb/trackDb/mouse/mm9/trackDb.ra
  • lines changed 55, context: html, text, full: html, text
    Pulling mapability into a file so that you can track the alpha,beta,public progress
• src/hg/makeDb/trackDb/mouse/mm9/trackDb.wgEncode.ra
  • lines changed 1, context: html, text, full: html, text
    Pulling mapability into a file so that you can track the alpha,beta,public progress