72cb6aba88d4830eb0638ae27ab1fee6eb2c1d68
pauline
  Tue Jun 12 15:25:47 2012 -0700
Commented out check of san diego remote mysql as jorge says it is not working.
diff --git src/utils/qa/checkGenomeMysql src/utils/qa/checkGenomeMysql
index 0723652..e6b749d 100755
--- src/utils/qa/checkGenomeMysql
+++ src/utils/qa/checkGenomeMysql
@@ -35,19 +35,20 @@
 fi
 
 tableList=$(mysql --user=genome --host=genome-mysql.cse.ucsc.edu -A -Ne "show tables" $db)
 
 # for each table in list do a select * limit 5.
 # Want to limit output or else the query would take forever. However,
 # can't do limit 1 since the first row of every table is stored in
 # the metadata and thus, mysql will not actually touch the table
 # if you do a select statement with a limit 1. Thus, we do a limit 5.
 # Throw away result of select statement and allow MySQL errors to be reported.
 # Also, genome-mysql is actually two hosts.  Check both.
 for table in $tableList
 do
   mysql --user=genome --host=public-mysql1.cse.ucsc.edu -A -Ne "select * from $table limit 5" \
       $db > /dev/null
-  mysql --user=genome --host=hgfs-sd.cse.ucsc.edu -A -Ne "select * from $table limit 5" \
-      $db > /dev/null
+
+#PUT THIS BACK IF SD MACHINES COME BACK  mysql --user=genome --host=hgfs-sd.cse.ucsc.edu -A -Ne "select * from $table limit 5" \
+#      $db > /dev/null
 done
 exit 0