File Changes for hartera

v270_preview2 to v270_base (2012-07-10 to 2012-07-17) v270

• src/hg/inc/mafGene.h
  • lines changed 1, context: html, text, full: html, text
    Added support for option to add UTR.
• src/hg/lib/mafGene.c
  • lines changed 18, context: html, text, full: html, text
    Added code so that if the utr option is set, then alignments are retrieved for all exons not just the CDS region.
• src/hg/ratStuff/mafGene/mafGene.c
  • lines changed 21, context: html, text, full: html, text
    Added option and support for using a genePred file as input instead of a genePred table.
  • lines changed 2, context: html, text, full: html, text
    Added comments to code.
  • lines changed 9, context: html, text, full: html, text
    Added -utr option so that alignments can be retrieved for all exons not just the CDS region. Abort if the noTrans option is not used with the utr option.