Commits for hiram

v270_preview2 to v270_base (2012-07-10 to 2012-07-17) v270

• minimal page from makeGenomeDb.pl
  • src/hg/makeDb/trackDb/squirrel/speTri2/description.html - lines changed 120, context: html, text, full: html, text
• up to date with required parameters
  • src/hg/utils/automation/configFiles/speTri2.config.ra - lines changed 22, context: html, text, full: html, text
• minimal page from makeGenomeDb.pl
  • src/hg/makeDb/trackDb/pig/susScr3/description.html - lines changed 119, context: html, text, full: html, text
• up to date with required parameters
  • src/hg/utils/automation/configFiles/susScr3.config.ra - lines changed 29, context: html, text, full: html, text
• Bob's photograph for Trichechus_manatus
  • src/hg/htdocs/images/Trichechus_manatus_latirostris.jpg - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change shows no diff)
• up to date with required parameters
  • src/hg/utils/automation/configFiles/triMan1.config.ra - lines changed 23, context: html, text, full: html, text
• minimal page from makeGenomeDb.pl
  • src/hg/makeDb/trackDb/manatee/triMan1/description.html - lines changed 118, context: html, text, full: html, text
• minimal page from makeGenomeDb.pl
  • src/hg/makeDb/trackDb/dolphin/turTru2/description.html - lines changed 117, context: html, text, full: html, text
• up to date with required parameters
  • src/hg/utils/automation/configFiles/turTru2.config.ra - lines changed 24, context: html, text, full: html, text
• minimal page from makeGenomeDb.pl
  • src/hg/makeDb/trackDb/moleRat/hetGla1/description.html - lines changed 127, context: html, text, full: html, text
• up to date with required parameters
  • src/hg/utils/automation/configFiles/hetGla2.config.ra - lines changed 24, context: html, text, full: html, text
• WUSTL says this photo is from USDA - can not find at USDA
  • src/hg/htdocs/images/Vicugna_pacos.png - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change shows no diff)
• minimal page from makeGenomeDb.pl
  • src/hg/makeDb/trackDb/alpaca/vicPac1/description.html - lines changed 116, context: html, text, full: html, text
• up to date with required parameters
  • src/hg/utils/automation/configFiles/vicPac1.config.ra - lines changed 23, context: html, text, full: html, text
• minimal page from makeGenomeDb.pl
  • src/hg/makeDb/trackDb/baboon/papHam1/description.html - lines changed 118, context: html, text, full: html, text
• restore memk to potential cluster list
  • src/hg/utils/automation/HgAutomate.pm - lines changed 2, context: html, text, full: html, text
• update the gold.html to a generic page with external references
  • src/hg/utils/automation/makeGenomeDb.pl - lines changed 57, context: html, text, full: html, text
• new style automatic generated page from makeGenomeDb.pl
  • src/hg/makeDb/trackDb/mouseLemur/micMur1/gap.html - lines changed 60, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouseLemur/micMur1/gold.html - lines changed 19, context: html, text, full: html, text
• gold and gap pages from the new template procedure in makeGenomeDb.pl
  • src/hg/makeDb/trackDb/cat/felCat5/gap.html - lines changed 31, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/cat/felCat5/gold.html - lines changed 33, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/cat/felCat5/trackDb.ra - lines changed 8, context: html, text, full: html, text
• now constructing the gap description page
  • src/hg/utils/automation/makeGenomeDb.pl - lines changed 103, context: html, text, full: html, text
• update gap page count size format
  • src/hg/utils/automation/makeGenomeDb.pl - lines changed 3, context: html, text, full: html, text
• update size count format
  • src/hg/makeDb/trackDb/cat/felCat5/gap.html - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouseLemur/micMur1/gap.html - lines changed 1, context: html, text, full: html, text
• missing a comma
  • src/hg/makeDb/trackDb/cat/felCat5/gap.html - lines changed 1, context: html, text, full: html, text
• add link to NCBI assembly specifics
  • src/hg/makeDb/trackDb/cat/felCat5/gap.html - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/cat/felCat5/gold.html - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/chimp/panTro4/gap.html - lines changed 61, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/chimp/panTro4/gold.html - lines changed 21, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouseLemur/micMur1/gap.html - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouseLemur/micMur1/gold.html - lines changed 4, context: html, text, full: html, text
• add link to NCBI assembly information
  • src/hg/utils/automation/makeGenomeDb.pl - lines changed 6, context: html, text, full: html, text
• cleaning up the text for gold and gap pages
  • src/hg/utils/automation/makeGenomeDb.pl - lines changed 14, context: html, text, full: html, text
• clean up text due to review comments
  • src/hg/makeDb/trackDb/cat/felCat5/gap.html - lines changed 9, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/cat/felCat5/gold.html - lines changed 5, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/chimp/panTro4/gap.html - lines changed 11, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/chimp/panTro4/gold.html - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouseLemur/micMur1/gap.html - lines changed 6, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouseLemur/micMur1/gold.html - lines changed 5, context: html, text, full: html, text
• calrify link to NCBI assembly information
  • src/hg/makeDb/trackDb/cat/felCat5/gap.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/cat/felCat5/gold.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/chimp/panTro4/gap.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/chimp/panTro4/gold.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouseLemur/micMur1/gap.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouseLemur/micMur1/gold.html - lines changed 2, context: html, text, full: html, text
• clarify link to NCBI assembly information for gold and gap pages
  • src/hg/utils/automation/makeGenomeDb.pl - lines changed 4, context: html, text, full: html, text
• started patch9 build
  • src/hg/makeDb/doc/hg19.txt - lines changed 62, context: html, text, full: html, text