Commits for steve

v270_preview2 to v270_base (2012-07-10 to 2012-07-17) v270

• Releasing UW RNA-Seq (Release 1) to the RR (redmine #4469)
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/public/makefile - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/public/wgEncodeUwRnaSeq.ra - lines changed 6123, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/trackDb.wgEncode.ra - lines changed 1, context: html, text, full: html, text
• Added line for UW RNA-seq (redmine #4469)
  • src/hg/htdocs/ENCODE/downloadsMouse.html - lines changed 4, context: html, text, full: html, text
• Cricket reorganized the structure of wgEncodeReg.ra by breaking it up into three separate files as it should be. Also updated the makefiles. (redmine #7990)
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/makefile - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeReg.ra - lines changed 295, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeRegDnaseClustered.ra - lines changed 37, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeRegTfbsClustered.ra - lines changed 53, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeRegTxn.ra - lines changed 211, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/makefile - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeReg.ra - lines changed 295, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeRegDnaseClustered.ra - lines changed 37, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeRegTfbsClustered.ra - lines changed 53, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeRegTxn.ra - lines changed 211, context: html, text, full: html, text
• Releasing UCSC Regulation Transcription Track (Release 3) to the RR (redmine #7990)
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
• Changed '7' to '9' in title of Regulation Transcription track (redmine #7990)
  • src/hg/htdocs/ENCODE/downloads.html - lines changed 1, context: html, text, full: html, text
• Made some corrections to Kate's additions (redmine #7780)
  • src/hg/htdocs/ENCODE/index.html - lines changed 3, context: html, text, full: html, text
  • src/hg/htdocs/ENCODE/qualityMetrics.html - lines changed 1, context: html, text, full: html, text
• Made various corrections to the description page. Added links for Bowtie, SPP and MACS. Added the reference paper for SPP to the References section. (redmine #5697)
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUchicagoTfbs.release2.html - lines changed 155, context: html, text, full: html, text
• Made some additional changes (redmine #5697)
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUchicagoTfbs.release2.html - lines changed 5, context: html, text, full: html, text
• Made yet more corrections (redmine #5697)
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUchicagoTfbs.release2.html - lines changed 4, context: html, text, full: html, text
• Edited the Release Notes section (redmine #5697)
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUchicagoTfbs.release2.html - lines changed 6, context: html, text, full: html, text
• Staging UChicago TFBS (Release 2) on beta (redmine #5697)
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeUchicagoTfbs.ra - lines changed 2856, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text