Commits for fang

v269_base to v270_preview (2012-06-26 to 2012-07-03) v270

• update after running encodeMkFilesList for V2 files
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrHistone.ra - lines changed 153, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrTfbs.ra - lines changed 36, context: html, text, full: html, text
• add new expId, accession
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeUwRnaSeq.ra - lines changed 431, context: html, text, full: html, text
• unify liver short label, different age, strain, type of view
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.ra - lines changed 64, context: html, text, full: html, text
• clean up short labels
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.ra - lines changed 102, context: html, text, full: html, text
• fix short labels
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.ra - lines changed 3, context: html, text, full: html, text
• update with new submissions in the past week
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeLicrHistone.ra - lines changed 1873, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeLicrHistone.release3.ra - lines changed 219, context: html, text, full: html, text
• clean up long labels with old conventions
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.ra - lines changed 23, context: html, text, full: html, text
• clean up long labels, still have some rounds to go
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.ra - lines changed 157, context: html, text, full: html, text
• clean up longLabels
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.ra - lines changed 1, context: html, text, full: html, text
• clean up long labels
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.ra - lines changed 8, context: html, text, full: html, text
• remove RNA extract and localization form file sort order
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.ra - lines changed 2, context: html, text, full: html, text
• add strain in fileSortOrder
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.ra - lines changed 1, context: html, text, full: html, text
• clean up cell matrix labels
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.ra - lines changed 1, context: html, text, full: html, text
• clean up long labels
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.ra - lines changed 11, context: html, text, full: html, text
• clean up vew box labels
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.ra - lines changed 1, context: html, text, full: html, text
• set default setting for views and subtracks
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.ra - lines changed 42, context: html, text, full: html, text
• update description
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.html - lines changed 25, context: html, text, full: html, text
• add html entry
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.ra - lines changed 1, context: html, text, full: html, text
• clean up description
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.html - lines changed 5, context: html, text, full: html, text
• clean up descriptions
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.html - lines changed 2, context: html, text, full: html, text
• clean up descriptions
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.html - lines changed 1, context: html, text, full: html, text
• clean up space
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.html - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change shows no diff)
• removing files tables whose names has been changed, see note 28,29 #4469
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeUwRnaSeq.ra - lines changed 36, context: html, text, full: html, text
• added references
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.html - lines changed 24, context: html, text, full: html, text
• added release note
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.html - lines changed 7, context: html, text, full: html, text
• create note file
  • src/hg/makeDb/doc/encodeDccMm9/wgEncodeUwRnaSeq.release1.notes - lines changed 679, context: html, text, full: html, text
• fix duplicate long labels
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeUwRnaSeq.ra - lines changed 17, context: html, text, full: html, text