Commits for vsmalladi

v269_base to v270_preview (2012-06-26 to 2012-07-03) v270

• Fixed biochain broken link.
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/cv/public/cv.ra - lines changed 1, context: html, text, full: html, text
• Fixed orderurl for LICR lab to be contected to the correct lab.
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 15, context: html, text, full: html, text
• Renamed path of track to be release 2 of track. Redmine #8071.
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUmassDekker5C.patch.html - lines changed 212, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUmassDekker5C.patch.ra - lines changed 59, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUmassDekker5C.release2.html - lines changed 212, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUmassDekker5C.release2.ra - lines changed 59, context: html, text, full: html, text
• Added release 2 updates for track. Redmine #8071.
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUmassDekker5C.ra - lines changed 401, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUmassDekker5C.release2.html - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUmassDekker5C.release2.ra - lines changed 50, context: html, text, full: html, text
• Added dccAccession's and md5sum's for files. Redmine #8071.
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeUmassDekker5C.ra - lines changed 63, context: html, text, full: html, text
• Fixed for Redmine #7089
  1. Changed "RNAs > 200" to "RNAs greater than 200".
  
  2. Unitalicized "i.e." under Alignments view configuration
  
  3. Changed "mapped against hg19" to "mapped against mm9".
  
  4. Changed "values > 0.90" to "values greater than 0.90".
  
  5. Made the words "element data views" a hyperlink in the release notes.
  
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeCshlLongRnaSeq.release2.html - lines changed 6, context: html, text, full: html, text
• Fixed truncated file. Redmine #6627.
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeFsuRepliChip.ra - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeFsuRepliChip.ra - lines changed 2, context: html, text, full: html, text
• Updated long and short labels. This is a trial. Redmine #6627.
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeFsuRepliChip.ra - lines changed 67, context: html, text, full: html, text
• Merge branch 'master' into Development-Mouse
• Updated labels. Redmine #6627.
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeFsuRepliChip.ra - lines changed 9, context: html, text, full: html, text
• Updated html page, with suggestion from QA from Human release. Redmine #6627.
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeFsuRepliChip.html - lines changed 18, context: html, text, full: html, text
• Updated md5sum's. Redmine #6627.
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeFsuRepliChip.ra - lines changed 2, context: html, text, full: html, text
• Added dccAccessions and expId's. Also added last remaning raw data file. Redmine #6627.
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/alpha/wgEncodeFsuRepliChip.ra - lines changed 157, context: html, text, full: html, text
• Added 3 missing table references. Redmine #6627.
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeFsuRepliChip.ra - lines changed 26, context: html, text, full: html, text
• Added release notes for first release of track. Redmine #6627.
  • src/hg/makeDb/doc/encodeDccMm9/wgEncodeFsuRepliChip.release1.notes - lines changed 207, context: html, text, full: html, text
• Fixes for QA in Redmine #6627
  1. Forced ording in subtrack list to be EpiSC-5 and EpiSC-7 should come before ES cells
  2. Fixed misspelling of Enoderm
  3. Added spaces between values and units for days (9 d)
  5. Change "human genome" and "mouse genome"
  7. Added comma after i.e.
  8. Added comma after i.e.
  9. Changed "autocorrelation" -> "auto-correlation"
  10. Alphabetized References section
  
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeFsuRepliChip.html - lines changed 43, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/wgEncodeFsuRepliChip.ra - lines changed 8, context: html, text, full: html, text
• Fixed tag's of tier cell's to be t<tier number> instead of alphabetically.
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUmassDekker5C.release2.ra - lines changed 5, context: html, text, full: html, text