File Changes for fang

v271_preview to v271_preview2 (2012-07-24 to 2012-07-31) v271

• src/hg/makeDb/trackDb/cv/alpha/cv.ra
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    add genome to label for combined genome and gencode database search
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    modify label
• src/hg/makeDb/trackDb/human/hg19/wgEncodeProtGenoSuper.html
  • lines changed 1, context: html, text, full: html, text
    modify description
  • lines changed 1, context: html, text, full: html, text
    modify description
  • lines changed 13, context: html, text, full: html, text
    modify description
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    fix typo
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUncBsuProtGenc.release1.html
  • lines changed 21, context: html, text, full: html, text
    modify description
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    modify display convention
  • lines changed 25, context: html, text, full: html, text
    modify display convention
  • lines changed 1, context: html, text, full: html, text
    update display convention
  • lines changed 12, context: html, text, full: html, text
    modify display convention
  • lines changed 22, context: html, text, full: html, text
    modify display convention
  • lines changed 20, context: html, text, full: html, text
    modify display convention
  • lines changed 5, context: html, text, full: html, text
    modify display convention
  • lines changed 3, context: html, text, full: html, text
    fixing blank line, space, change peptide rank to rank
  • lines changed 3, context: html, text, full: html, text
    modify display conventions
  • lines changed 27, context: html, text, full: html, text
    changed the field name from the long definition/description back to column name based on the email form John, added subtitle for fields that are common for regular and PTM peptides
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    format italics for column header in the text
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    shorten the length of the text so it's easier to read
  • lines changed 7, context: html, text, full: html, text
    add display convention entry specific to PTM peptide
  • lines changed 16, context: html, text, full: html, text
    remove subtitle in display convention, instead added for regular (PTM) peptide only in the end of the description of the field
  • lines changed 41, context: html, text, full: html, text
    modify methods in 2nd paragraph
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    modify methods section
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    some polishing
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    some more editing
  • lines changed 2, context: html, text, full: html, text
    change underline to bold as underline maybe confused with link
  • lines changed 22, context: html, text, full: html, text
    updates from John's email
  • lines changed 33, context: html, text, full: html, text
    some edit for GENCODE version
  • lines changed 2, context: html, text, full: html, text
    change size of footnote
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    modify footnote size
  • lines changed 33, context: html, text, full: html, text
    update references
• src/hg/makeDb/trackDb/human/hg19/wgEncodeUncBsuProtGenc.release1.ra
  • lines changed 7, context: html, text, full: html, text
    modify long labels
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    modify long labels
  • lines changed 10, context: html, text, full: html, text
    clean up long labels
  • lines changed 2, context: html, text, full: html, text
    clean up long labels
  • lines changed 12, context: html, text, full: html, text
    clean up shortlabel
  • lines changed 12, context: html, text, full: html, text
    add column number to bigBed type
  • lines changed 1, context: html, text, full: html, text
    modify view labels
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    added and to the view labels
  • lines changed 1, context: html, text, full: html, text
    modify view labels
  • lines changed 1, context: html, text, full: html, text
    modify view labels
  • lines changed 12, context: html, text, full: html, text
    update longLabel
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    clean up labels
  • lines changed 6, context: html, text, full: html, text
    turn on the new tracks
  • lines changed 13, context: html, text, full: html, text
    fix longLabels
  • lines changed 12, context: html, text, full: html, text
    fix longLabels
  • lines changed 12, context: html, text, full: html, text
    fix longLabels
  • lines changed 12, context: html, text, full: html, text
    fix longLabels
  • lines changed 4, context: html, text, full: html, text
    fix longLabels
  • lines changed 2, context: html, text, full: html, text
    add option box for protocol
  • lines changed 1, context: html, text, full: html, text
    fix in gel