8b57e7b99e48f4a14eb47ad5660d6482de555d0d markd Sat Sep 15 15:16:21 2012 -0700 add link to GeneCards in GENCODE details page diff --git src/hg/hgc/gencodeClick.c src/hg/hgc/gencodeClick.c index 43250e2..4dbbbc1 100644 --- src/hg/hgc/gencodeClick.c +++ src/hg/hgc/gencodeClick.c @@ -217,30 +217,35 @@ printf("Strand%s\n", transAnno->strand); printf("Biotype%s%s\n", transAttrs->transcriptType, transAttrs->geneType); /* FIXME: add href o */ printf("Status%s%s\n", transAttrs->transcriptStatus, transAttrs->geneStatus); printf("Annotation Level%s (%d)\n", getLevelDesc(transAttrs->level), transAttrs->level); printf("Annotation Method%s%s\n", getMethodDesc(transcriptSource->source), getMethodDesc(geneSource->source)); if (haveTsl) { char *tslDesc = getSupportLevelDesc(tsl); printf("Transcription Support Level%s\n", tslDesc, tslDesc); } printf("HUGO gene%s\n", transAttrs->geneName); printf("CCDS%s\n", transAttrs->ccdsId); +printf("GeneCards"); +if (!isEmpty(transAttrs->geneName)) + printf("%s\n", + transAttrs->geneName, transAttrs->geneName); +printf("\n"); // FIXME: add sequence here?? printf("\n"); } static void writeSequenceHtml(struct trackDb *tdb, char *gencodeId, struct genePred *transAnno) /* write links to get sequences */ { printf("\n"); printf("\n"); printf("\n"); if (transAnno->cdsStart < transAnno->cdsEnd) { // protein coding printf("
Sequences
"); hgcAnchorSomewhere("htcGeneMrna", gencodeId, tdb->table, seqName);