Commits for hiram

v274_preview2 to v274_base (2012-10-02 to 2012-10-09) v274

• updated image with phylo group labels
  • src/hg/htdocs/images/phylo/mm10_60way.png - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change shows no diff)
• this one is actually a gif
  • src/hg/htdocs/images/phylo/mm10_60way.gif - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change shows no diff)
  • src/hg/htdocs/images/phylo/mm10_60way.png - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change shows no diff)
• change mm10_60way image to gif
  • src/hg/makeDb/trackDb/mouse/mm10/trackDb.60way.ra - lines changed 1, context: html, text, full: html, text
• remove the Chinese from Rhesus
  • src/hg/makeDb/trackDb/mouse/mm10/cons60way.html - lines changed 1, context: html, text, full: html, text
• proper alpha beta public tags on the altSeqSomposite tracks
  • src/hg/makeDb/trackDb/human/hg19/trackDb.ra - lines changed 4, context: html, text, full: html, text
• done with masking and ready for lastz run
  • src/hg/makeDb/doc/mm10Strains1.txt - lines changed 352, context: html, text, full: html, text
• correct release date on micMur1
  • src/hg/makeDb/trackDb/human/hg19/cons46way.html - lines changed 1, context: html, text, full: html, text
• experiment to see if genbank.mrna.xeno.load can be yes for a large scaffold assembly
  • src/hg/makeDb/genbank/etc/genbank.conf - lines changed 1, context: html, text, full: html, text
• do not load refseq mrna native on gadMor1
  • src/hg/makeDb/genbank/etc/genbank.conf - lines changed 1, context: html, text, full: html, text
• genbank is reset to gadMor1.refseq.mrna.native.load = no and gadMor1.genbank.mrna.xeno.load = no
  • src/hg/makeDb/doc/gadMor1.txt - lines changed 2, context: html, text, full: html, text
• new patch track for hg19
  • src/hg/makeDb/trackDb/human/hg19/altSeqComposite10.ra - lines changed 104, context: html, text, full: html, text