Commits for brianlee

v274_base to v275_preview (2012-10-09 to 2012-10-16) v275

• Changing link for SK-N-SH termId term URL RM#9282
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 6, context: html, text, full: html, text
• Changing termId and link for LHCN-M2 RM#9282
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 2, context: html, text, full: html, text
• Copying alpha/cv.ra to beta/cv.ra, alphabetized restructuring of stanzas so that fields appear consistent, for example such as vendorId and vendorName always coming last across cell lines and antibodies.
  • src/hg/makeDb/trackDb/cv/beta/cv.ra - lines changed 11003, context: html, text, full: html, text
• Replacing termId and termUrl for GM12878 RM#9307 RM#9282
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 6, context: html, text, full: html, text
• Adding host species and antibody type (Poly/mono-clonal) for antibodies: BRF2 COREST_(ab24166) SEZH2_(39875) H3K4me3_(04-745) HDAC2_(A300-705A) HDAC6_(A301-341A) Mxi1_(AF4185) NELFe PHF8_(A301-772A) PLU1 RBBP5_(A300-109A) SAP30_(39731) RM#9342
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 13, context: html, text, full: html, text
• Copying alpha cv.ra to beta cv.ra changes to unify vendor name and antibody description, removal of spaces, unifying gene name to antibody target name RM#9305
  • src/hg/makeDb/trackDb/cv/beta/cv.ra - lines changed 260, context: html, text, full: html, text
• Adding ENCODE GEO Accession numbers to hg19 BroadHistone OpenChromDnase OpenChromFaire
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeBroadHistone.ra - lines changed 11, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeOpenChromDnase.ra - lines changed 269, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeOpenChromFaire.ra - lines changed 59, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeBroadHistone.ra - lines changed 11, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeOpenChromDnase.ra - lines changed 269, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeOpenChromFaire.ra - lines changed 59, context: html, text, full: html, text
• Adding GEO numbers, updates to metaData for ENCODE GisRnaPet UwDgf HaibTfbs RM#9359
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeGisRnaPet.ra - lines changed 51, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeHaibTfbs.ra - lines changed 1136, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeUwDgf.ra - lines changed 176, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeGisRnaPet.ra - lines changed 51, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeHaibTfbs.ra - lines changed 1136, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeUwDgf.ra - lines changed 176, context: html, text, full: html, text
• Adding GEO numbers, updates to metaData for ENCODE UwHistone RM#9359
  • src/hg/makeDb/trackDb/human/hg19/metaDb/beta/wgEncodeUwHistone.ra - lines changed 17, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/public/wgEncodeUwHistone.ra - lines changed 17, context: html, text, full: html, text
• Adding GEO numbers, updates to metaData for ENCODE mm9 UwDnase RM#9359
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/beta/wgEncodeUwDnase.ra - lines changed 493, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/mouse/mm9/metaDb/public/wgEncodeUwDnase.ra - lines changed 493, context: html, text, full: html, text